config.json

{
    "parameters": {
        "AIDS_Duration_In_Months": 9,
        "AIDS_Stage_Infectivity_Multiplier": 4.5,
        "Acute_Duration_In_Months": 1.7,
        "Acute_Stage_Infectivity_Multiplier": 5.3,
        "Age_Initialization_Distribution_Type": "DISTRIBUTION_COMPLEX",
        "Base_Individual_Sample_Rate": 1,
        "Base_Infectivity": 0.0005942186798021557,
        "Base_Mortality": 0,
        "Base_Year": 1960.5,
        "Birth_Rate_Dependence": "INDIVIDUAL_PREGNANCIES_BY_AGE_AND_YEAR",
        "Birth_Rate_Time_Dependence": "NONE",
        "CD4_At_Death_LogLogistic_Heterogeneity": 0.7,
        "CD4_At_Death_LogLogistic_Scale": 2.96,
        "CD4_Post_Infection_Weibull_Heterogeneity": 0.2756,
        "CD4_Post_Infection_Weibull_Scale": 560.43,
        "Campaign_Filename": "D:/Dropbox (NYU Langone Health)/EMOD HIV User Group Shared Folder/input_file_bundles/Nyanza_calibration/202301_Nyanza_Baseline_MalariaOngoing/InputFiles/Templates/campaign_Nyanza_baseline_202301.json",
        "Coital_Dilution_Factor_2_Partners": 0.75,
        "Coital_Dilution_Factor_3_Partners": 0.6,
        "Coital_Dilution_Factor_4_Plus_Partners": 0.45,
        "Condom_Transmission_Blocking_Probability": 0.8,
        "Config_Name": "",
        "Custom_Coordinator_Events": [],
        "Custom_Individual_Events": [
            "ANCPartners_Flag",
            "ARTStaging0",
            "ARTStaging1",
            "ARTStaging2",
            "ARTStaging3",
            "ARTStaging4",
            "ARTStaging5",
            "ARTStaging6",
            "ARTStaging8",
            "ARTStaging9",
            "CheckIfANCPartners",
            "CheckIfNewIndexPartners",
            "Commercial_DelayFromDebutToUptake",
            "Commercial_Dropout",
            "Commercial_Uptake",
            "Facility_Flag",
            "HCTTestingLoop0",
            "HCTTestingLoop1",
            "HCTUptakePostDebut0",
            "HCTUptakePostDebut1",
            "HCTUptakePostDebut2",
            "HCTUptakePostDebut3",
            "HCTUptakePostDebut7",
            "HCTUptakePostDebut8",
            "HCTUptakePostDebut9",
            "HIV_Positive_at_ANC",
            "LTFU0",
            "LinkingToART0",
            "LinkingToPreART0",
            "LostForever0",
            "LostForever9",
            "Needs_Combination_PMTCT",
            "Needs_Option_A",
            "Needs_Option_B",
            "Needs_PMTCT_Diagnostic_Test",
            "Needs_sdNVP_PMTCT",
            "NewIndexPartners_Flag",
            "Non_Program_MC",
            "OnART0",
            "OnART1",
            "OnART3",
            "OnPreART0",
            "OnPreART1",
            "OnPreART2",
            "OnPreART3",
            "OnPreART4",
            "PrEP_Expired",
            "PrEP_Initiated",
            "Program_VMMC",
            "Refer_to_ART",
            "ShouldNotHappen",
            "WillNotReceiveTraditionalMaleCircumcision",
            "WillReceiveMedicalMaleCircumcision",
            "WillReceiveTraditionalMaleCircumcision"
        ],
        "Custom_Node_Events": [],
        "Custom_Reports_Filename": "",
        "Days_Between_Symptomatic_And_Death_Weibull_Heterogeneity": 0.5,
        "Days_Between_Symptomatic_And_Death_Weibull_Scale": 618.341625,
        "Death_Rate_Dependence": "NONDISEASE_MORTALITY_BY_YEAR_AND_AGE_FOR_EACH_GENDER",
        "Demographics_Filenames": [
            "Demographics.json",
            "Accessibility_and_Risk_IP_Overlay.json",
            "PFA_Overlay.json",
            "Risk_Assortivity_Overlay.json"
        ],
        "Enable_Aging": 1,
        "Enable_Birth": 1,
        "Enable_Coital_Dilution": 1,
        "Enable_Default_Reporting": 1,
        "Enable_Demographics_Birth": 0,
        "Enable_Demographics_Builtin": 0,
        "Enable_Demographics_Reporting": 1,
        "Enable_Infectivity_Reservoir": 0,
        "Enable_Interventions": 1,
        "Enable_Maternal_Protection": 0,
        "Enable_Natural_Mortality": 1,
        "Enable_Property_Output": 0,
        "Enable_Spatial_Output": 0,
        "Enable_Susceptibility_Scaling": 0,
        "Enable_Termination_On_Zero_Total_Infectivity": 0,
        "Geography": "Kenya",
        "HIV_Adult_Survival_Scale_Parameter_Intercept": 21.182,
        "HIV_Adult_Survival_Scale_Parameter_Slope": -0.2717,
        "HIV_Adult_Survival_Shape_Parameter": 2,
        "HIV_Age_Max_for_Adult_Age_Dependent_Survival": 50,
        "HIV_Age_Max_for_Child_Survival_Function": 15,
        "HIV_Child_Survival_Rapid_Progressor_Fraction": 0.57,
        "HIV_Child_Survival_Rapid_Progressor_Rate": 1.52,
        "HIV_Child_Survival_Slow_Progressor_Scale": 16,
        "HIV_Child_Survival_Slow_Progressor_Shape": 2.7,
        "Heterogeneous_Infectiousness_LogNormal_Scale": 0,
        "Incubation_Period_Constant": 0,
        "Incubation_Period_Distribution": "CONSTANT_DISTRIBUTION",
        "Individual_Sampling_Type": "FIXED_SAMPLING",
        "Infection_Updates_Per_Timestep": 1,
        "Infectivity_Scale_Type": "CONSTANT_INFECTIVITY",
        "Inset_Chart_Has_Interventions": [],
        "Inset_Chart_Has_IP":[],
        "Inset_Chart_Include_Coital_Acts":0,
        "Inset_Chart_Include_Pregnancies":0,
        "Load_Balance_Filename": "",
        "Male_To_Female_Relative_Infectivity_Ages": [
            0,
            15,
            20
        ],
        "Male_To_Female_Relative_Infectivity_Multipliers": [
            2.4459106205320693,
            2.4459106205320693,
            1.0114088803135588
        ],
        "Maternal_Infection_Transmission_Probability": 0.3,
        "Maternal_Transmission_ART_Multiplier": 0.03334,
        "Memory_Usage_Halting_Threshold_Working_Set_MB": 50000,
        "Migration_Model": "NO_MIGRATION",
        "Min_Days_Between_Adding_Relationships": 0,
        "Mortality_Time_Course": "DAILY_MORTALITY",
        "Node_Grid_Size": 0.009,
        "Num_Cores": 1,
        "Number_Basestrains": 1,
        "PFA_Burnin_Duration_In_Days": 5475,
        "PFA_Cum_Prob_Selection_Threshold": 0.2,
        "Population_Density_Infectivity_Correction": "CONSTANT_INFECTIVITY",
        "Population_Scale_Type": "FIXED_SCALING",
        "Post_Infection_Acquisition_Multiplier": 0,
        "Post_Infection_Mortality_Multiplier": 0,
        "Post_Infection_Transmission_Multiplier": 1,
        "Report_Coital_Acts": 0,
        "Report_Coordinator_Event_Recorder": 0,
        "Report_Event_Recorder": 0,
        "Report_Event_Recorder_End_Year": 2032,
        "Report_Event_Recorder_Events": [
            "PrEP_Initiated",
            "PrEP_Expired",
            "DiseaseDeaths",
            "NonDiseaseDeaths",
            "Refer_to_ART",
            "NewInfectionEvent",
            "HIVInfectionStageEnteredLatent"
        ],
        "Report_Event_Recorder_Ignore_Events_In_List": 0,
        "Report_Event_Recorder_Individual_Properties": [],
        "Report_Event_Recorder_Max_Age_Years": 37,
        "Report_Event_Recorder_Min_Age_Years": 14,
        "Report_Event_Recorder_Must_Have_IP_Key_Value": "",
        "Report_Event_Recorder_Must_Have_Intervention": "PrEP",
        "Report_Event_Recorder_Node_IDs_Of_Interest": [],
        "Report_Event_Recorder_PropertyChange_IP_Key_Of_Interest": "",
        "Report_Event_Recorder_Start_Year": 2022,
        "Report_HIV_ART": 0,
        "Report_HIV_ByAgeAndGender": 1,
        "Report_HIV_ByAgeAndGender_Add_Concordant_Relationships": 0,
        "Report_HIV_ByAgeAndGender_Add_Relationships": 0,
        "Report_HIV_ByAgeAndGender_Add_Transmitters": 0,
        "Report_HIV_ByAgeAndGender_Collect_Age_Bins_Data": [
            0,
            1,
            5,
            10,
            15,
            20,
            25,
            30,
            35,
            40,
            45,
            50,
            55,
            60,
            65,
            70,
            75,
            80,
            100
        ],
        "Report_HIV_ByAgeAndGender_Collect_Circumcision_Data": 0,
        "Report_HIV_ByAgeAndGender_Collect_Gender_Data": 1,
        "Report_HIV_ByAgeAndGender_Collect_HIV_Data": 0,
        "Report_HIV_ByAgeAndGender_Collect_HIV_Stage_Data": 0,
        "Report_HIV_ByAgeAndGender_Collect_IP_Data": [
        ],
        "Report_HIV_ByAgeAndGender_Collect_Intervention_Data": [
        ],
        "Report_HIV_ByAgeAndGender_Collect_On_Art_Data": 0,
        "Report_HIV_ByAgeAndGender_Event_Counter_List": [],
        "Report_HIV_ByAgeAndGender_Has_Intervention_With_Name": "",
        "Report_HIV_ByAgeAndGender_Start_Year": 1990,
        "Report_HIV_ByAgeAndGender_Stop_Year": 2040,
        "Report_HIV_ByAgeAndGender_Stratify_Infected_By_CD4": 0,
        "Report_HIV_Event_Channels_List": [],
        "Report_HIV_Infection": 0,
        "Report_HIV_Mortality": 0,
        "Report_HIV_Period": 365,
        "Report_Node_Event_Recorder": 0,
        "Report_Relationship_End": 0,
        "Report_Relationship_Start": 0,
        "Report_Surveillance_Event_Recorder": 0,
        "Report_Transmission": 0,
        "Run_Number": 42725,
        "STI_Coinfection_Acquisition_Multiplier": 5.5,
        "STI_Coinfection_Transmission_Multiplier": 5.5,
        "Serialized_Population_Reading_Type": "NONE",
        "Serialized_Population_Writing_Type": "NONE",
        "Sexual_Debut_Age_Female_Weibull_Heterogeneity": 0.06335625114816806,
        "Sexual_Debut_Age_Female_Weibull_Scale": 15.122526661036778,
        "Sexual_Debut_Age_Male_Weibull_Heterogeneity": 0.2929318575525576,
        "Sexual_Debut_Age_Male_Weibull_Scale": 15.633872769775984,
        "Sexual_Debut_Age_Min": 13,
        "Simulation_Duration": 29200,
        "Simulation_Timestep": 30.4166666666667,
        "Simulation_Type": "HIV_SIM",
        "Start_Time": 0,
        "logLevel_InfectionHIV": "ERROR",
        "logLevel_Instrumentation": "ERROR",
        "logLevel_Memory": "ERROR",
        "logLevel_OutbreakIndividual": "ERROR",
        "logLevel_ReportUtilities": "ERROR",
        "logLevel_Simulation": "ERROR",
        "logLevel_SusceptibilityHIV": "ERROR",
        "logLevel_default": "ERROR",
        "x_Base_Population": 0.0003,
        "x_Birth": 1,
        "x_Other_Mortality": 1,
        "Scenario": "Default_Scenario_Name"
    }
}