Skip to content

experimenting with clang-tidy #140

@jenshnielsen

Description

@jenshnielsen

Building using

cmake -DCMAKE_EXPORT_COMPILE_COMMANDS=ON ..
cp buildclang/compile_commands.json .

gives

(dcprogsclang) ✔ ~/ucl/dcprogs/HJCFIT [develop|✚ 1…15⚑ 8] clang-tidy-3.8 likelihood/*.cc
1 warning generated.
1 warning generated.
1 warning generated.
1 warning generated.
2 warnings generated.
7 warnings generated.
7 warnings generated.
8 warnings generated.
9 warnings generated.
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/exact_survivor.cc:166:9: warning: Variable 'current_t' with floating point type 't_real' should not be used as a loop counter [clang-analyzer-security.FloatLoopCounter]
        for(current_t -= _tau; current_t > 0; current_t -= _tau, ++m)  {
        ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/exact_survivor.cc:166:9: note: Variable 'current_t' with floating point type 't_real' should not be used as a loop counter
        for(current_t -= _tau; current_t > 0; current_t -= _tau, ++m)  {
        ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:159:5: warning: Call to 'alloca' has an allocation size of 0 bytes [clang-analyzer-unix.API]
    ei_declare_aligned_stack_constructed_variable(LhsScalar, blockA, sizeA, blocking.blockA());
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:592:75: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                      (sizeof(TYPE)*SIZE<=EIGEN_STACK_ALLOCATION_LIMIT) ? EIGEN_ALIGNED_ALLOCA(sizeof(TYPE)*SIZE) \
                                                                          ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:585:34: note: expanded from macro 'EIGEN_ALIGNED_ALLOCA'
    #define EIGEN_ALIGNED_ALLOCA EIGEN_ALLOCA
                                 ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:527:26: note: expanded from macro 'EIGEN_ALLOCA'
    #define EIGEN_ALLOCA alloca
                         ^
/usr/include/alloca.h:39:22: note: expanded from macro 'alloca'
#define alloca(size)    __alloca(size)
                        ^
/usr/include/alloca.h:40:24: note: expanded from macro '__alloca'
#define __alloca(size)  __builtin_alloca(size)
                        ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/missed_eventsG.cc:50:7: note: Calling constructor for 'MissedEventsG'
    : MissedEventsG( _qmatrix, _tau,
      ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/missed_eventsG.h:86:23: note: Calling constructor for 'Matrix'
                      fa_factor_(_qmatrix.fa() * (_tau * _qmatrix.aa()).exp()) {}
                      ^
/usr/local/include/eigen3/Eigen/src/Core/Matrix.h:296:7: note: Calling 'PlainObjectBase::_set_noalias'
      Base::_set_noalias(other);
      ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:653:14: note: Calling 'assign_selector::run'
      return internal::assign_selector<Derived,OtherDerived,false>::run(this->derived(), other.derived());
             ^
/usr/local/include/eigen3/Eigen/src/Core/Assign.h:527:93: note: Calling 'PlainObjectBase::lazyAssign'
  static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
                                                                                            ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:414:14: note: Calling 'MatrixBase::lazyAssign'
      return Base::lazyAssign(other.derived());
             ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:284:3: note: Calling 'ProductBase::evalTo'
  other.derived().evalTo(derived());
  ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:109:58: note: Calling 'ProductBase::scaleAndAddTo'
    inline void evalTo(Dest& dst) const { dst.setZero(); scaleAndAddTo(dst,Scalar(1)); }
                                                         ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:118:71: note: Calling 'GeneralProduct::scaleAndAddTo'
    inline void scaleAndAddTo(Dest& dst, const Scalar& alpha) const { derived().scaleAndAddTo(dst,alpha); }
                                                                      ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:404:10: note: Left side of '||' is false
      if(m_lhs.cols()==0 || m_lhs.rows()==0 || m_rhs.cols()==0)
         ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:404:10: note: Left side of '||' is false
      if(m_lhs.cols()==0 || m_lhs.rows()==0 || m_rhs.cols()==0)
         ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:404:7: note: Taking false branch
      if(m_lhs.cols()==0 || m_lhs.rows()==0 || m_rhs.cols()==0)
      ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:427:7: note: Calling 'parallelize_gemm'
      internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>(GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), this->rows(), this->cols(), Dest::Flags&RowMajorBit);
      ^
/usr/local/include/eigen3/Eigen/src/Core/products/Parallelizer.h:96:3: note: Calling 'gemm_functor::operator()'
  func(0,rows, 0,cols);
  ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:220:5: note: Taking false branch
    if(cols==-1)
    ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:223:5: note: Calling 'general_matrix_matrix_product::run'
    Gemm::run(rows, cols, m_lhs.cols(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:159:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(LhsScalar, blockA, sizeA, blocking.blockA());
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:590:18: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
    TYPE* NAME = (BUFFER)!=0 ? (BUFFER) \
                 ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:159:5: note: '?' condition is true
    ei_declare_aligned_stack_constructed_variable(LhsScalar, blockA, sizeA, blocking.blockA());
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:592:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                      (sizeof(TYPE)*SIZE<=EIGEN_STACK_ALLOCATION_LIMIT) ? EIGEN_ALIGNED_ALLOCA(sizeof(TYPE)*SIZE) \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:159:5: note: Call to 'alloca' has an allocation size of 0 bytes
    ei_declare_aligned_stack_constructed_variable(LhsScalar, blockA, sizeA, blocking.blockA());
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:592:75: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                      (sizeof(TYPE)*SIZE<=EIGEN_STACK_ALLOCATION_LIMIT) ? EIGEN_ALIGNED_ALLOCA(sizeof(TYPE)*SIZE) \
                                                                          ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:585:34: note: expanded from macro 'EIGEN_ALIGNED_ALLOCA'
    #define EIGEN_ALIGNED_ALLOCA EIGEN_ALLOCA
                                 ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:527:26: note: expanded from macro 'EIGEN_ALLOCA'
    #define EIGEN_ALLOCA alloca
                         ^
/usr/include/alloca.h:39:22: note: expanded from macro 'alloca'
#define alloca(size)    __alloca(size)
                        ^
/usr/include/alloca.h:40:24: note: expanded from macro '__alloca'
#define __alloca(size)  __builtin_alloca(size)
                        ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:7: warning: Potential leak of memory pointed to by field 'm_data' [clang-analyzer-unix.Malloc]
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
      ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:8: note: Assuming '_initial' is not equal to 0
    if(_initial) {
       ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:5: note: Taking true branch
    if(_initial) {
    ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:40: note: Calling 'ProductBase::operator const Eigen::Matrix<double, 1, -1, 1, 1, -1> &'
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
                                       ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:126:7: note: Calling 'PlainObjectBase::resize'
      m_result.resize(m_lhs.rows(), m_rhs.cols());
      ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:250:9: note: Calling 'DenseStorage::resize'
        m_storage.resize(nbRows*nbCols, nbRows, nbCols);
        ^
/usr/local/include/eigen3/Eigen/src/Core/DenseStorage.h:360:7: note: Taking true branch
      if(size != _Rows*m_cols)
      ^
/usr/local/include/eigen3/Eigen/src/Core/DenseStorage.h:363:9: note: Taking true branch
        if (size)
        ^
/usr/local/include/eigen3/Eigen/src/Core/DenseStorage.h:364:20: note: Calling 'conditional_aligned_new_auto'
          m_data = internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size);
                   ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:420:3: note: Taking false branch
  if(size==0)
  ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:423:36: note: Calling 'conditional_aligned_malloc'
  T *result = reinterpret_cast<T*>(conditional_aligned_malloc<Align>(sizeof(T)*size));
                                   ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:301:10: note: Calling 'aligned_malloc'
  return aligned_malloc(size);
         ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:220:14: note: Memory is allocated
    result = std::malloc(size);
             ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:6: note: Assuming 'result' is non-null
  if(!result && size)
     ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:14: note: Left side of '&&' is false
  if(!result && size)
             ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:301:10: note: Returned allocated memory
  return aligned_malloc(size);
         ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:423:36: note: Returned allocated memory
  T *result = reinterpret_cast<T*>(conditional_aligned_malloc<Align>(sizeof(T)*size));
                                   ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:424:3: note: Taking false branch
  if(NumTraits<T>::RequireInitialization)
  ^
/usr/local/include/eigen3/Eigen/src/Core/DenseStorage.h:364:20: note: Returned allocated memory
          m_data = internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size);
                   ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:250:9: note: Returned allocated memory
        m_storage.resize(nbRows*nbCols, nbRows, nbCols);
        ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:126:7: note: Returned allocated memory
      m_result.resize(m_lhs.rows(), m_rhs.cols());
      ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:40: note: Returned allocated memory
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
                                       ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:7: note: Potential leak of memory pointed to by field 'm_data'
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:530:3: warning: Potential leak of memory pointed to by 'actualRhsPtr' [clang-analyzer-unix.Malloc]
  }
  ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:8: note: Assuming '_initial' is not equal to 0
    if(_initial) {
       ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:5: note: Taking true branch
    if(_initial) {
    ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:40: note: Calling 'ProductBase::operator const Eigen::Matrix<double, 1, -1, 1, 1, -1> &'
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
                                       ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:127:7: note: Calling 'ProductBase::evalTo'
      derived().evalTo(m_result);
      ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:109:58: note: Calling 'ProductBase::scaleAndAddTo'
    inline void evalTo(Dest& dst) const { dst.setZero(); scaleAndAddTo(dst,Scalar(1)); }
                                                         ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:118:71: note: Calling 'GeneralProduct::scaleAndAddTo'
    inline void scaleAndAddTo(Dest& dst, const Scalar& alpha) const { derived().scaleAndAddTo(dst,alpha); }
                                                                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:348:7: note: Calling 'gemv_selector::run'
      internal::gemv_selector<Side,(int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:364:5: note: Calling 'gemv_selector::run'
    gemv_selector<OnTheRight,OtherStorageOrder,BlasCompatible>
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:512:9: note: '?' condition is true
        DirectlyUseRhs ? const_cast<RhsScalar*>(actualRhs.data()) : static_rhs.data());
        ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:590:18: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
    TYPE* NAME = (BUFFER)!=0 ? (BUFFER) \
                 ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:592:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                      (sizeof(TYPE)*SIZE<=EIGEN_STACK_ALLOCATION_LIMIT) ? EIGEN_ALIGNED_ALLOCA(sizeof(TYPE)*SIZE) \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: Calling 'aligned_malloc'
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:593:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                    : Eigen::internal::aligned_malloc(sizeof(TYPE)*SIZE) );  \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:220:14: note: Memory is allocated
    result = std::malloc(size);
             ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:6: note: Assuming 'result' is non-null
  if(!result && size)
     ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:14: note: Left side of '&&' is false
  if(!result && size)
             ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: Returned allocated memory
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:593:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                    : Eigen::internal::aligned_malloc(sizeof(TYPE)*SIZE) );  \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:512:9: note: '?' condition is true
        DirectlyUseRhs ? const_cast<RhsScalar*>(actualRhs.data()) : static_rhs.data());
        ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:594:98: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
    Eigen::internal::aligned_stack_memory_handler<TYPE> EIGEN_CAT(NAME,_stack_memory_destructor)((BUFFER)==0 ? NAME : 0,SIZE,sizeof(TYPE)*SIZE>EIGEN_STACK_ALLOCATION_LIMIT)
                                                                                                 ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:514:5: note: Taking false branch
    if(!DirectlyUseRhs)
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:530:3: note: Potential leak of memory pointed to by 'actualRhsPtr'
  }
  ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:530:3: warning: Potential leak of memory pointed to by 'actualRhsPtr_stack_memory_destructor.m_ptr' [clang-analyzer-unix.Malloc]
  }
  ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:8: note: Assuming '_initial' is not equal to 0
    if(_initial) {
       ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:5: note: Taking true branch
    if(_initial) {
    ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:40: note: Calling 'ProductBase::operator const Eigen::Matrix<double, 1, -1, 1, 1, -1> &'
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
                                       ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:127:7: note: Calling 'ProductBase::evalTo'
      derived().evalTo(m_result);
      ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:109:58: note: Calling 'ProductBase::scaleAndAddTo'
    inline void evalTo(Dest& dst) const { dst.setZero(); scaleAndAddTo(dst,Scalar(1)); }
                                                         ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:118:71: note: Calling 'GeneralProduct::scaleAndAddTo'
    inline void scaleAndAddTo(Dest& dst, const Scalar& alpha) const { derived().scaleAndAddTo(dst,alpha); }
                                                                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:348:7: note: Calling 'gemv_selector::run'
      internal::gemv_selector<Side,(int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:364:5: note: Calling 'gemv_selector::run'
    gemv_selector<OnTheRight,OtherStorageOrder,BlasCompatible>
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:512:9: note: '?' condition is true
        DirectlyUseRhs ? const_cast<RhsScalar*>(actualRhs.data()) : static_rhs.data());
        ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:590:18: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
    TYPE* NAME = (BUFFER)!=0 ? (BUFFER) \
                 ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is false
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:592:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                      (sizeof(TYPE)*SIZE<=EIGEN_STACK_ALLOCATION_LIMIT) ? EIGEN_ALIGNED_ALLOCA(sizeof(TYPE)*SIZE) \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: Calling 'aligned_malloc'
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:593:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                    : Eigen::internal::aligned_malloc(sizeof(TYPE)*SIZE) );  \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:220:14: note: Memory is allocated
    result = std::malloc(size);
             ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:6: note: Assuming 'result' is non-null
  if(!result && size)
     ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:231:14: note: Left side of '&&' is false
  if(!result && size)
             ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: Returned allocated memory
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:593:23: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
                    : Eigen::internal::aligned_malloc(sizeof(TYPE)*SIZE) );  \
                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:512:9: note: '?' condition is true
        DirectlyUseRhs ? const_cast<RhsScalar*>(actualRhs.data()) : static_rhs.data());
        ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:511:5: note: '?' condition is true
    ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
    ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:594:98: note: expanded from macro 'ei_declare_aligned_stack_constructed_variable'
    Eigen::internal::aligned_stack_memory_handler<TYPE> EIGEN_CAT(NAME,_stack_memory_destructor)((BUFFER)==0 ? NAME : 0,SIZE,sizeof(TYPE)*SIZE>EIGEN_STACK_ALLOCATION_LIMIT)
                                                                                                 ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:514:5: note: Taking false branch
    if(!DirectlyUseRhs)
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:530:3: note: Potential leak of memory pointed to by 'actualRhsPtr_stack_memory_destructor.m_ptr'
  }
  ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:243:5: warning: Memory allocated by alloca() should not be deallocated [clang-analyzer-unix.Malloc]
    std::free(ptr);
    ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:8: note: Assuming '_initial' is not equal to 0
    if(_initial) {
       ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:79:5: note: Taking true branch
    if(_initial) {
    ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:81:40: note: Calling 'ProductBase::operator const Eigen::Matrix<double, 1, -1, 1, 1, -1> &'
      t_initvec const phif_times_Hfa = occupancies(_G, false) * Hfa;
                                       ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:127:7: note: Calling 'ProductBase::evalTo'
      derived().evalTo(m_result);
      ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:109:58: note: Calling 'ProductBase::scaleAndAddTo'
    inline void evalTo(Dest& dst) const { dst.setZero(); scaleAndAddTo(dst,Scalar(1)); }
                                                         ^
/usr/local/include/eigen3/Eigen/src/Core/ProductBase.h:118:71: note: Calling 'GeneralProduct::scaleAndAddTo'
    inline void scaleAndAddTo(Dest& dst, const Scalar& alpha) const { derived().scaleAndAddTo(dst,alpha); }
                                                                      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:348:7: note: Calling 'gemv_selector::run'
      internal::gemv_selector<Side,(int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:364:5: note: Calling 'gemv_selector::run'
    gemv_selector<OnTheRight,OtherStorageOrder,BlasCompatible>
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:514:5: note: Taking false branch
    if(!DirectlyUseRhs)
    ^
/usr/local/include/eigen3/Eigen/src/Core/GeneralProduct.h:530:3: note: Calling '~aligned_stack_memory_handler'
  }
  ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:552:46: note: Left side of '&&' is false
      if(NumTraits<T>::RequireInitialization && m_ptr)
                                             ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:554:7: note: Taking true branch
      if(m_deallocate)
      ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:555:9: note: Calling 'aligned_free'
        Eigen::internal::aligned_free(m_ptr);
        ^
/usr/local/include/eigen3/Eigen/src/Core/util/Memory.h:243:5: note: Memory allocated by alloca() should not be deallocated
    std::free(ptr);
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:425:31: warning: The left operand of '+' is a garbage value [clang-analyzer-core.UndefinedBinaryOperatorResult]
  RealScalar t = m.coeff(0,0) + m.coeff(1,1);
                              ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:68:12: note: Calling 'occupancies_impl_'
    return occupancies_impl_(_idealg, _initial);
           ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:54:50: note: Assuming '_open' is 0
      std::tuple<t_rmatrix, t_rvector> problem = _open ?
                                                 ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:54:50: note: '?' condition is false
      std::tuple<t_rmatrix, t_rvector> problem = _open ?
                                                 ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/occupancies.cc:59:9: note: Calling constructor for 'JacobiSVD'
        svd(std::get<0>(problem), Eigen::ComputeThinU|Eigen::ComputeThinV);
        ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:578:7: note: Calling 'JacobiSVD::compute'
      compute(matrix, computationOptions);
      ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:840:3: note: Taking false branch
  if(scale==RealScalar(0)) scale = RealScalar(1);
  ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:844:3: note: Taking false branch
  if(m_rows!=m_cols)
  ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:853:5: note: Taking false branch
    if(m_computeFullU) m_matrixU.setIdentity(m_rows,m_rows);
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:854:5: note: Taking false branch
    if(m_computeThinU) m_matrixU.setIdentity(m_rows,m_diagSize);
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:855:5: note: Taking false branch
    if(m_computeFullV) m_matrixV.setIdentity(m_cols,m_cols);
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:856:5: note: Taking false branch
    if(m_computeThinV) m_matrixV.setIdentity(m_cols, m_diagSize);
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:862:3: note: Loop condition is true.  Entering loop body
  while(!finished)
  ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:868:5: note: Loop condition is true.  Entering loop body
    for(Index p = 1; p < m_diagSize; ++p)
    ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:870:7: note: Loop condition is true.  Entering loop body
      for(Index q = 0; q < p; ++q)
      ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:879:51: note: Left side of '||' is true
        if(abs(m_workMatrix.coeff(p,q))>threshold || abs(m_workMatrix.coeff(q,p)) > threshold)
                                                  ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:886:11: note: Calling 'real_2x2_jacobi_svd'
          internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right);
          ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:425:18: note: Calling 'PlainObjectBase::coeff'
  RealScalar t = m.coeff(0,0) + m.coeff(1,1);
                 ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:140:7: note: Taking false branch
      if(Flags & RowMajorBit)
      ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:143:16: note: Calling 'DenseStorage::data'
        return m_storage.data()[rowId + colId * m_storage.rows()];
               ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:143:16: note: Returning from 'DenseStorage::data'
        return m_storage.data()[rowId + colId * m_storage.rows()];
               ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:143:49: note: Calling 'DenseStorage::rows'
        return m_storage.data()[rowId + colId * m_storage.rows()];
                                                ^
/usr/local/include/eigen3/Eigen/src/Core/PlainObjectBase.h:143:49: note: Returning from 'DenseStorage::rows'
        return m_storage.data()[rowId + colId * m_storage.rows()];
                                                ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:425:18: note: Returning from 'PlainObjectBase::coeff'
  RealScalar t = m.coeff(0,0) + m.coeff(1,1);
                 ^
/usr/local/include/eigen3/Eigen/src/SVD/JacobiSVD.h:425:31: note: The left operand of '+' is a garbage value
  RealScalar t = m.coeff(0,0) + m.coeff(1,1);
                              ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/root_finder.cc:282:20: warning: Value stored to 'value_next' during its initialization is never read [clang-analyzer-deadcode.DeadStores]
            t_real value_next(current);
                   ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/root_finder.cc:282:20: note: Value stored to 'value_next' during its initialization is never read
            t_real value_next(current);
                   ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/time_filter.cc:84:28: warning: Value stored to 'n' during its initialization is never read [clang-analyzer-deadcode.DeadStores]
    t_rvector::Index const n(_intervals.size());
                           ^
/Users/jhn/ucl/dcprogs/HJCFIT/likelihood/time_filter.cc:84:28: note: Value stored to 'n' during its initialization is never read
    t_rvector::Index const n(_intervals.size());

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions