las-digital-models/Dockerfile.pdal at dev · IGNF/las-digital-models · GitHub

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## Note :
## This Dockerfile allows us to build a PDAL image with the custom fork and branch
## It's used when it's necessary to use a specific version of PDAL
## typicaly when some features are not available in the conda-forge channel
## the PDAL version is specified by variables GITHUB_SERVER_URL and GITHUB_REPOSITORY
## and the branch by GITHUB_SHA
##

# code from https://github.com/PDAL/PDAL/blob/master/scripts/docker/ubuntu/Dockerfile
FROM condaforge/mambaforge:latest AS mamba_pdal

ENV LANG=C.UTF-8 LC_ALL=C.UTF-8

RUN conda create -n las_digital_models -y
ARG GITHUB_SHA
ARG GITHUB_REPOSITORY="PDAL/PDAL"
ARG GITHUB_SERVER_URL="https://github.com"

SHELL ["conda", "run", "-n", "las_digital_models", "/bin/bash", "-c"]

RUN mamba install -c conda-forge git compilers conda-pack cmake make ninja sysroot_linux-64=2.17 && \
    mamba install --yes -c conda-forge pdal --only-deps

RUN mamba install numpy requests gdal cgal geopandas pytest pip pyproj hydra-core hydra-colorlog rasterio fiona parallel

RUN rm -rf /opt/conda/envs/las_digital_models/lib/libpdal*
RUN rm -rf /opt/conda/envs/las_digital_models/lib/libpdal_plugin*

RUN git clone "${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}" pdal && \
    cd pdal ; \
    git checkout ${GITHUB_SHA}

RUN mkdir -p pdal/build && \
    cd pdal/build  && \
    CXXFLAGS="-Werror=strict-aliasing" LDFLAGS="-Wl,-rpath-link,$CONDA_PREFIX/lib" cmake -G Ninja  \
        -DCMAKE_BUILD_TYPE=Release \
        -DCMAKE_LIBRARY_PATH:FILEPATH="$CONDA_PREFIX/lib" \
        -DCMAKE_INCLUDE_PATH:FILEPATH="$CONDA_PREFIX/include" \
        -DCMAKE_INSTALL_PREFIX="$CONDA_PREFIX" \
        -DBUILD_PLUGIN_CPD=OFF \
        -DBUILD_PLUGIN_PGPOINTCLOUD=ON \
        -DBUILD_PLUGIN_NITF=ON \
        -DBUILD_PLUGIN_ICEBRIDGE=ON \
        -DBUILD_PLUGIN_HDF=ON \
        -DBUILD_PLUGIN_TILEDB=ON \
        -DBUILD_PLUGIN_E57=ON \
        -DBUILD_PGPOINTCLOUD_TESTS=OFF \
        -DWITH_ZSTD=ON \
        ..

RUN cd pdal/build  && \
    ninja

RUN cd pdal/build  && \
    ctest -V

RUN cd pdal/build  && \
    ninja install

RUN git clone https://github.com/PDAL/python.git

RUN mamba install --yes -c conda-forge pybind11

RUN mkdir -p python/build && \
    cd python/build  && \
    CXXFLAGS="-Werror=strict-aliasing" LDFLAGS="-Wl,-rpath-link,$CONDA_PREFIX/lib" cmake -G Ninja  \
        -DCMAKE_BUILD_TYPE=Release \
        -DCMAKE_LIBRARY_PATH:FILEPATH="$CONDA_PREFIX/lib" \
        -DCMAKE_INCLUDE_PATH:FILEPATH="$CONDA_PREFIX/include" \
        -DCMAKE_INSTALL_PREFIX="$CONDA_PREFIX/lib/python3.13/site-packages/" \
        ..

RUN cd python/build  && ninja

RUN cd python/build  && ctest -V

RUN cd python/build  && ninja install

RUN git clone https://github.com/PDAL/python-plugins.git pdal-python && \
    cd pdal-python && git checkout 1.6.5  && \
    pip install -vv . --no-deps


# Add our environment
RUN pip install laspy[lazrs]
RUN pip install ign-pdal-tools
RUN pip install rasterstats

FROM debian:bullseye-slim

# install PDAL
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/bin/pdal /opt/conda/envs/las_digital_models/bin/pdal
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/bin/python /opt/conda/envs/las_digital_models/bin/python
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/lib/ /opt/conda/envs/las_digital_models/lib/
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/bin/ /opt/conda/envs/las_digital_models/bin/
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/share/gdal/ /opt/conda/envs/las_digital_models/share/gdal/
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/ssl /opt/conda/envs/las_digital_models/ssl
COPY --from=mamba_pdal /opt/conda/envs/las_digital_models/share/proj/proj.db /opt/conda/envs/las_digital_models/share/proj/proj.db

ENV PATH=$PATH:/opt/conda/envs/las_digital_models/bin/:/opt/conda/envs/las_digital_models/
ENV PROJ_LIB=/opt/conda/envs/las_digital_models/share/proj/
ENV GDAL_DATA=/opt/conda/envs/las_digital_models/share/gdal/

WORKDIR /las-digital-models
RUN mkdir tmp
COPY las_digital_models las_digital_models
COPY test test
COPY configs configs
COPY run.sh run.sh