wolframscript -script runSegButler.wls -imgdir ../testdata/test3D/ -objSz 120 -downscale 0.5 -imgstacks
flags:
-objSz [Size of objects in image in pixels]
-downscale [Downscale factor of original image, useful to speed up analysis]
Image files need to have the following format:
*_xy_0-463_z_1-44.*
with 0.463 being the xy pixelsize and 1.44 being the z pixelsize