kegg_pull version 3.1.0
When doing an organism specific linking of pathway to compound, it returns an empty value.
# doesn't work
kegg_pull map link entry-ids path:hsa00010 compound
{}
# works
kegg_pull map link entry-ids path:map00010 compound
{
"path:map00010": [
"cpd:C00022",
"cpd:C00024",
"cpd:C00031",
"cpd:C00033",
"cpd:C00036",
"cpd:C00068",
"cpd:C00074",
"cpd:C00084",
"cpd:C00085",
"cpd:C00103",
"cpd:C00111",
"cpd:C00118",
"cpd:C00186",
"cpd:C00197",
"cpd:C00221",
"cpd:C00236",
"cpd:C00267",
"cpd:C00354",
"cpd:C00469",
"cpd:C00631",
"cpd:C00668",
"cpd:C01159",
"cpd:C01172",
"cpd:C01451",
"cpd:C05125",
"cpd:C06186",
"cpd:C06187",
"cpd:C06188",
"cpd:C15972",
"cpd:C15973",
"cpd:C16255"
]
}
I feel like the first case should work, especially as all of the compound entries shown on KEGG itself are shown with the organism specific pathway, not the generic one.
kegg_pull version 3.1.0
When doing an organism specific linking of pathway to compound, it returns an empty value.
I feel like the first case should work, especially as all of the compound entries shown on KEGG itself are shown with the organism specific pathway, not the generic one.