Skip to content

Full join instead of inner join cohorts together #5

@jackhump

Description

@jackhump

Current code inner joins SNP-Gene pairs recursively across cohorts, meaning that the eventual meta-analysis can only be run on the SNP-Genes present in every cohort. This was due to RE2C failing on missing values.

ACTION:

Swap out inner join to a full join, figure out how to make RE2C happy. If necessary, let RE2C step throw out SNP-Genes with missing rows. Not ideal.

Metadata

Metadata

Assignees

Labels

No labels
No labels

Type

No type
No fields configured for issues without a type.

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions