diff --git a/.github/workflows/pre-commit.yml b/.github/workflows/pre-commit.yml index 069b019..58901c2 100644 --- a/.github/workflows/pre-commit.yml +++ b/.github/workflows/pre-commit.yml @@ -5,6 +5,8 @@ on: branches: - "**" pull_request: + branches: + - main jobs: pre-commit: @@ -26,10 +28,14 @@ jobs: key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt', '**/requirements-dev.txt') }} restore-keys: ${{ runner.os }}-pip- - - name: Install Pre-Commit and Dependencies + - name: Install Python dependencies run: | + set -e python -m pip install --upgrade pip - pip install pre-commit + pip install -r requirements.txt + pip install -r requirements-dev.txt + pip install torch + pip install torch_geometric - name: Run Pre-Commit Checks run: pre-commit run --all-files --show-diff-on-failure diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index a824ae6..e0861d4 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -3,7 +3,9 @@ repos: rev: v4.3.0 hooks: - id: trailing-whitespace + exclude: '\.svg$|docs/source/_autosummary/' - id: end-of-file-fixer + exclude: '\.svg$|docs/source/_autosummary/' - id: check-yaml - id: check-added-large-files diff --git a/README.md b/README.md index 5f16362..f3eb75c 100644 --- a/README.md +++ b/README.md @@ -8,7 +8,7 @@ ## Welcome to BioNeuralNet Beta 0.1 -![BioNeuralNet Logo](/assets/BioNeuralNet_canva_logo_WB.png) +![BioNeuralNet Logo](/assets/LOGO_WB.png) **Note:** This is a **beta version** of BioNeuralNet. It is under active development, and certain features may be incomplete or subject to change. Feedback and bug reports are highly encouraged to help us diff --git a/assets/BioNeuralNet_canva_logo_TB.png b/assets/BioNeuralNet_canva_logo_TB.png deleted file mode 100644 index 2c660ca..0000000 Binary files a/assets/BioNeuralNet_canva_logo_TB.png and /dev/null differ diff --git a/assets/BioNeuralNet_canva_logo_TB.svg b/assets/BioNeuralNet_canva_logo_TB.svg deleted file mode 100644 index dc24ebc..0000000 --- a/assets/BioNeuralNet_canva_logo_TB.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/assets/BioNeuralNet_canva_logo_WB.png b/assets/BioNeuralNet_canva_logo_WB.png deleted file mode 100644 index 947b946..0000000 Binary files a/assets/BioNeuralNet_canva_logo_WB.png and /dev/null differ diff --git a/assets/BioNeuralNet_canva_logo_WB.svg b/assets/BioNeuralNet_canva_logo_WB.svg deleted file mode 100644 index a927e2a..0000000 --- a/assets/BioNeuralNet_canva_logo_WB.svg +++ /dev/null @@ -1 +0,0 @@ - diff --git a/assets/LOGO_TB.png b/assets/LOGO_TB.png new file mode 100644 index 0000000..4b6fd75 Binary files /dev/null and b/assets/LOGO_TB.png differ diff --git a/assets/LOGO_TB.svg b/assets/LOGO_TB.svg new file mode 100644 index 0000000..2c54b73 --- /dev/null +++ b/assets/LOGO_TB.svg @@ -0,0 +1 @@ + diff --git a/assets/LOGO_WB.png b/assets/LOGO_WB.png new file mode 100644 index 0000000..e0b9673 Binary files /dev/null and b/assets/LOGO_WB.png differ diff --git a/assets/LOGO_WB.svg b/assets/LOGO_WB.svg new file mode 100644 index 0000000..3f529c6 --- /dev/null +++ b/assets/LOGO_WB.svg @@ -0,0 +1 @@ + diff --git a/bioneuralnet/analysis/__init__.py b/bioneuralnet/analysis/__init__.py index b7446b3..b1eb47c 100644 --- a/bioneuralnet/analysis/__init__.py +++ b/bioneuralnet/analysis/__init__.py @@ -1,3 +1,3 @@ -from correlation_analysis import Correlation +from .correlation_analysis import Correlation __all__ = ["Correlation"]