DiffBio/.github/workflows/docs.yml at main · avitai/DiffBio · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
name: Deploy Documentation

on:
  push:
    branches:
      - main
    paths:
      - 'docs/**'
      - 'mkdocs.yml'
      - 'pyproject.toml'
      - '.github/actions/setup-diffbio/action.yml'
      - '.github/workflows/docs.yml'
  workflow_dispatch:

permissions:
  contents: write

jobs:
  deploy:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout repository
        uses: actions/checkout@v4
        with:
          fetch-depth: 0

      - name: Set up DiffBio docs environment
        uses: ./.github/actions/setup-diffbio
        with:
          python-version: '3.11'
          cache-suffix: docs-py311
          linux-editable-target: ".[docs]"

      - name: Build documentation
        run: uv run mkdocs build --clean --strict

      - name: Prepare deployment directory
        run: |
          mkdir -p deploy/diffbio
          mv site/* deploy/diffbio/
          echo "docs.avitai.bio" > deploy/CNAME
          cat > deploy/index.html << 'EOF'
          <!DOCTYPE html>
          <html>
          <head>
              <meta charset="utf-8">
              <title>Avitai Documentation</title>
              <style>
                  body {
                      font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Helvetica Neue", Arial, sans-serif;
                      max-width: 800px;
                      margin: 100px auto;
                      padding: 20px;
                      text-align: center;
                  }
                  h1 { color: #333; }
                  ul { list-style: none; padding: 0; }
                  li { margin: 10px 0; }
                  a {
                      color: #0066cc;
                      text-decoration: none;
                      font-size: 18px;
                      padding: 10px 20px;
                      display: inline-block;
                      border: 1px solid #0066cc;
                      border-radius: 5px;
                      transition: all 0.3s;
                  }
                  a:hover {
                      background: #0066cc;
                      color: white;
                  }
              </style>
          </head>
          <body>
              <h1>Avitai Documentation</h1>
              <p>Available documentation:</p>
              <ul>
                  <li><a href="./diffbio/">DiffBio - Differentiable Bioinformatics</a></li>
              </ul>
          </body>
          </html>
          EOF

      - name: Deploy to GitHub Pages
        uses: peaceiris/actions-gh-pages@v3
        with:
          github_token: ${{ secrets.GITHUB_TOKEN }}
          publish_dir: ./deploy
          force_orphan: true
          cname: docs.avitai.bio