diff --git a/lib/babel-options-util.js b/lib/babel-options-util.js
index ee26306b..18b95d25 100644
--- a/lib/babel-options-util.js
+++ b/lib/babel-options-util.js
@@ -26,6 +26,7 @@ function _getPresetEnv(config, project) {
   delete presetOptions.generatorOpts;
   delete presetOptions.plugins;
   delete presetOptions.postTransformPlugins;
+  delete presetOptions.compileModules;
 
   return [require.resolve("@babel/preset-env"), presetOptions];
 }