-
Notifications
You must be signed in to change notification settings - Fork 2
Expand file tree
/
Copy pathtraining_dim_analysis.py
More file actions
244 lines (214 loc) · 8.75 KB
/
training_dim_analysis.py
File metadata and controls
244 lines (214 loc) · 8.75 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
import UtilsNetwork as Utils
import os
import matplotlib.pyplot as plt
import numpy as np
from sklearn.linear_model import LinearRegression
import itertools
import pandas as pd
import sys
import subprocess
import sobol_seq
import joblib
from scipy.stats import boxcox
model_type = "gp"
print(sys.argv)
norm = sys.argv[1]
norm_name=norm
if norm == "1":
norm=1
elif norm == "2":
norm = 2
elif norm == "inf":
norm = np.inf
sample_vec = [17, 33, 65, 129, 257, 513, 1025]
case_study = "Parabolic"
parameter_grid = {
"regularization_parameter": [0.000001],
"kernel_regularizer": ["L2"],
"learning_rate": [0.01],
"hidden_layers": [5],
"neurons": [10],
"dropout_value": [0]
}
setup = list(itertools.product(*parameter_grid.values()))[0]
folder = sys.argv[2]
if sys.argv[3] == "true":
train = True
else:
train = False
point = sys.argv[4]
rs = "None"
path = "CaseStudies/"+case_study+"/Models/"+folder
if point == "random":
N_run = 60
fl = "NetworkSingleConf_rand.py"
elif point == "sobol":
N_run = 60
fl = "NetworkSingleConf_sobol.py"
else:
raise ValueError()
if train:
os.mkdir("CaseStudies/"+case_study+"/Models/"+folder)
for i in range(len(sample_vec)):
for run in range(N_run):
print("#########################")
print("Sample:", sample_vec[i])
new_path = path + "/Sample_" + str(sample_vec[i]) + "_" + str(run)
if model_type == "net":
arguments = list()
arguments.append(str("parab"))
arguments.append(str(sample_vec[i]))
arguments.append(str("mae"))
for value in setup:
arguments.append(str(value))
arguments.append(str(new_path))
arguments.append(str("x_max"))
arguments.append(str(0))
arguments.append(str(0))
arguments.append(str(6))
arguments.append(str("true"))
arguments.append(str(1))
arguments.append(str("train_loss"))
arguments.append(str("m"))
arguments.append(str(run))
arguments.append(point)
if sys.platform == "linux" or sys.platform == "linux2":
string_to_exec = "bsub python3 " + fl
for arg in arguments:
string_to_exec = string_to_exec + " " + arg
os.system(string_to_exec)
elif sys.platform == "win32":
python = os.environ['PYTHON36']
p = subprocess.Popen([python, fl] + arguments)
p.wait()
else:
arguments = list()
arguments.append(str("parab"))
arguments.append(str("x_max"))
arguments.append(str(sample_vec[i]))
arguments.append(str(6))
arguments.append(str(0))
arguments.append(str(0))
arguments.append(str("true"))
arguments.append(str("m"))
arguments.append(str(point))
arguments.append(str(run))
arguments.append(new_path)
if sys.platform == "linux" or sys.platform == "linux2":
string_to_exec = "bsub python3 GaussianProcess_bound.py "
for arg in arguments:
string_to_exec = string_to_exec + " " + arg
os.system(string_to_exec)
elif sys.platform == "win32":
python = os.environ['PYTHON36']
p = subprocess.Popen([python, "GaussianProcess_bound.py"] + arguments)
p.wait()
else:
_, y, _, _, _, _ = Utils.get_data("parab", 3999, "x_max", 6, 7,model_path_folder=None, normalize=False, scaler="m", point=point)
std = np.std(y)
print("standard dev ", std)
mpe_list = list()
mpe_list_train = list()
b1_list = list()
b2_list = list()
prod_list=list()
for i in range(len(sample_vec)):
print("#########################")
print("Sample:", sample_vec[i])
mean_MPE = 0
mean_train = 0
mean_bound = 0
mean_bound_2 = 0
mean_prod = 0
N_true = 0
for run in range(N_run):
#print("Run: ", run)
new_path = path + "/Sample_"+str(sample_vec[i])+"_"+str(run)
path_file = new_path +"/Score.txt"
path_file_train = new_path + "/Score_train.txt"
with open(path_file, "r") as f:
lines = f.readlines()
scores = lines[1].split(",")
MPE = float(scores[0])
if not np.isnan(MPE):
N_true=N_true+1
mean_MPE = mean_MPE + MPE**2
else:
print("not adding")
#print("MPE:", MPE)
with open(path_file_train, "r") as f:
lines = f.readlines()
scores = lines[1].split(",")
MPE_train = float(scores[0])
mean_train = mean_train + MPE_train**2
if model_type == "net":
model = Utils.load_data(new_path)
else:
model = joblib.load(new_path + "/model_GP.sav")
minmax = pd.read_csv(new_path + "/MinMax.txt", header=0)
min_val = minmax.Min.values[0]
max_val = minmax.Max.values[0]
if point == "random":
preds = model.predict(np.random.uniform(0,1,(1000,7)))
elif point == "sobol":
preds = model.predict(sobol_seq.i4_sobol_generate(7, 1000))
else:
raise ValueError()
std_app = np.std(preds*(max_val - min_val)+min_val)
print("True STD: ",std)
print("Appr STD: ",std_app)
'''
prod = 1
for j in range(len(model.layers)):
if model.layers[j].get_weights():
weight_matrix = model.layers[j].get_weights()[0]
# for k in range(weight_matrix.shape[1]):
# print(weight_matrix[:,k])
# print(sum(abs(weight_matrix[:,k])))
# print(weight_matrix.shape)
# print(weight_matrix)
norm_mat = np.linalg.norm(weight_matrix, ord=norm, axis=None, keepdims=False)
# print(norm_inf)
prod = prod * norm_mat
'''
#print(prod)
#minmax = pd.read_csv(new_path + "/MinMax.txt", header=0)
#min_val = minmax.Min.values[0]
#max_val = minmax.Max.values[0]
#preds = model.predict(np.random.uniform(0,1,(500,7)))
#std = np.std(preds*(max_val - min_val)+min_val)
#bound = (std + prod)/sample_vec[i]**0.5
bound_2 = (2*(std+std_app)/sample_vec[i]**0.5 + MPE_train)**2
#bound_2 = (2 * (std + std) / sample_vec[i] ** 0.5 + MPE_train) ** 2
#mean_bound = mean_bound + bound
mean_bound_2 = mean_bound_2 + bound_2
#mean_prod = mean_prod + prod
print(N_true)
mean_MPE = np.sqrt(mean_MPE/N_true)
mean_train = np.sqrt(mean_train / N_true)
#mean_bound = mean_bound / N_run
mean_bound_2 = np.sqrt(mean_bound_2 / N_true)
mean_prod = mean_prod / N_run
mpe_list.append(mean_MPE)
mpe_list_train.append(mean_train)
#b1_list.append(mean_bound)
b2_list.append(mean_bound_2)
prod_list.append(mean_prod)
print("Mean Test:", mean_MPE)
print("Mean Train:",mean_train)
with open("./"+folder+"_"+point+".txt","w") as fi:
fi.write("Samples,Generaliz_err,Training_err,Bound\n")
for i in range(len(sample_vec)):
fi.write(str(sample_vec[i])+","+str(mpe_list[i])+","+str(mpe_list_train[i])+","+str(b2_list[i])+"\n")
print("Average prod over samples: ",np.mean(prod_list) )
reg = LinearRegression().fit(np.log10(sample_vec).reshape(-1,1), np.log10(mpe_list).reshape(-1,1))
x = np.linspace(min(sample_vec), max(sample_vec), 100)
x = np.log10(x)
y=reg.predict(x.reshape(-1,1))
print('Coefficients: \n', reg.coef_)
plt.scatter(np.log10(sample_vec), np.log10(mpe_list), label="Mean\nGeneralization Error \n"+ str(-reg.coef_[0][0]))
plt.scatter(np.log10(sample_vec), np.log10(mpe_list_train), label="Mean\nTraining Error")
plt.scatter(np.log10(sample_vec), np.log10(b2_list),label="Bound\n std/N^0.5")
plt.plot(x, y)
plt.legend(loc=0)
plt.show()