REF: jobs -> num_threads in 3dDeconvolve for consistency

Author: mvdoc

nipype/interfaces/afni/model.py

@@ -153,7 +153,7 @@ class DeconvolveInputSpec(AFNICommandInputSpec):
         'instead of the bucket dataset, if possible.',
         argstr='-cbucket %s')
     out_file = File(desc='output statistics file', argstr='-bucket %s')
-    jobs = traits.Int(
+    num_threads = traits.Int(
         desc='run the program with provided number of sub-processes',
         argstr='-jobs %d')
     fout = traits.Bool(
@@ -278,8 +278,6 @@ def _parse_inputs(self, skip=None):
             self.inputs.num_glt = len(self.inputs.gltsym)
         if not isdefined(self.inputs.out_file):
             self.inputs.out_file = 'Decon.nii'
-        if isdefined(self.inputs.jobs):
-            self.inputs.num_threads = self.inputs.jobs
 
         return super(Deconvolve, self)._parse_inputs(skip)
 

nipype/interfaces/afni/tests/test_auto_Deconvolve.py

@@ -49,7 +49,6 @@ def test_Deconvolve_inputs():
             sep=' ',
         ),
         input1D=dict(argstr='-input1D %s', ),
-        jobs=dict(argstr='-jobs %d', ),
         legendre=dict(argstr='-legendre', ),
         local_times=dict(
             argstr='-local_times',
@@ -70,10 +69,7 @@ def test_Deconvolve_inputs():
             argstr='-num_stimts %d',
             position=-6,
         ),
-        num_threads=dict(
-            nohash=True,
-            usedefault=True,
-        ),
+        num_threads=dict(argstr='-jobs %d', ),
         ortvec=dict(argstr='-ortvec %s %s', ),
         out_file=dict(argstr='-bucket %s', ),
         outputtype=dict(),