11.. _install :
22
3- ======================
4- Download and install
5- ======================
3+ ====================
4+ Download and install
5+ ====================
66
77This page covers the necessary steps to install Nipype.
88
9- Nipype for users
10- ----------------
11-
129Using docker
1310~~~~~~~~~~~~
1411
1512You can follow the `Nipype tutorial <https://miykael.github.io/nipype_tutorial/ >`_
1613
14+ or use this docker container: `docker pull nipype/nipype `
15+
1716Using conda
1817~~~~~~~~~~~
1918
@@ -75,7 +74,7 @@ path to compile the traits package.
7574From source
7675~~~~~~~~~~~
7776
78- The current release is found here: `<https://github.com/nipy/nipype/releases/latest >`_.
77+ The most recent release is found here: `<https://github.com/nipy/nipype/releases/latest >`_.
7978
8079The development version: [`zip <http://github.com/nipy/nipype/zipball/master >`__ `tar.gz
8180<http://github.com/nipy/nipype/tarball/master> `__]
@@ -100,69 +99,19 @@ the tests::
10099 python -c "import nipype; print(nipype.__version__)"
101100 python -c "import nipype; nipype.test()"
102101
103- Installation for developers
104- ---------------------------
105-
106- Developers should start `here <../devel/testing_nipype.html >`_.
107-
108- Recommended Software
109- --------------------
110-
111- Strong Recommendations
112- ~~~~~~~~~~~~~~~~~~~~~~
113-
114- IPython _
115- Interactive python environment.
116-
117- Matplotlib _
118- Plotting library
119-
120- Sphinx _ 1.1
121- Required for building the documentation
122-
123- `Graphviz <http://www.graphviz.org/ >`_
124- Required for building the documentation.
125-
126102Interface Dependencies
127103~~~~~~~~~~~~~~~~~~~~~~
128104
129- You might not need some of the following packages, depending on what exactly you
130- want to use nipype for. If you do need any of them, install nipype's wrapper package
131- (`` nipype.interfaces ``), then install the programs separately onto your computer, just
132- like you would install any other app.
105+ Nipype provides wrappers around many neuroimaging tools and contains some
106+ algorithms. These tools will need to be installed for Nipype to run. You can
107+ create containers with different versions of these tools installed using
108+ ` Neurodocker < https://github.com/kaczmarj/neurodocker >`_
133109
134- FSL _
135- 4.1.0 or later
136-
137- matlab _
138- 2008a or later
139-
140- SPM _
141- SPM5 or later
142-
143- FreeSurfer _
144- FreeSurfer v4.0.0 or later
145-
146- AFNI _
147- 2009_12_31_1431 or later
148-
149- Slicer _
150- 3.6 or later
151-
152- Nipy _
153- 0.4 or later
154-
155- Nitime _
156- (optional)
157-
158- ANTS _
159-
160- MRtrix _ and MRtrix3 _
161-
162- Camino _
110+ Installation for developers
111+ ---------------------------
163112
164- Camino2Trackvis _
113+ Developers should start ` here < ../devel/testing_nipype.html >`_.
165114
166- ConnectomeViewer _
115+ Developers can also use this docker container: ` docker pull nipype/nipype:master `
167116
168117.. include :: ../links_names.txt
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