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[Change] Traceability Runtime Queries And Orphan Detection Follow-Up #170

@djm81

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@djm81

Modules-repo runtime follow-up for the split core change traceability-01-index-and-orphans. This issue owns only bundle-side query/report command delivery and runtime trace indexing behavior after the core schema/contracts split.\n\nCounterpart core issue: nold-ai/specfact-cli#242\nTarget feature: #161

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    change-proposalProposal for a new changeenhancementNew feature or requestopenspecopenspec changeprojectSpecfact project related topic

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