From e355dcd8e8ac6741b00a100030fdcf24c0cd9174 Mon Sep 17 00:00:00 2001 From: Dragon-AI Agent Date: Fri, 27 Jun 2025 12:45:14 +0000 Subject: [PATCH 1/2] Add cochlear nerve root term (UBERON:7770009) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Added new term 'cochlear nerve root' with definition based on validated assertions from Aurelian analysis of literature. Definition includes only assertions confirmed by reference PMID:27289629. Term is classified as a nerve root and is part of the brain. Addresses #3570 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude --- src/ontology/uberon-edit.obo | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index 2c5b9bc263..fda5cbfe1d 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -221148,6 +221148,16 @@ intersection_of: part_of UBERON:0001159 ! sigmoid colon relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 ! David Osumi-Sutherland property_value: dcterms-date "2025-05-27T17:07:22Z" xsd:dateTime +[Term] +id: UBERON:7770009 +name: cochlear nerve root +namespace: uberon +def: "Continuation of the cochlear nerve inside the brain. This is located at the dorsolateral junction of the pons and medulla and divides the ventral cochlear nucleus into anteroventral and posteroventral regions." [PMID:27289629] +is_a: UBERON:0002211 ! nerve root +relationship: part_of UBERON:0000955 ! brain +relationship: dc-contributor https://orcid.org/0000-0002-8688-6599 ! @dragon-ai-agent +property_value: dcterms-date "2025-06-27T12:00:00Z" xsd:dateTime + [Term] id: UBERON:8000000 name: first instar larva stage From cfb49ef01c2295941cd9a4b6699193fb32159571 Mon Sep 17 00:00:00 2001 From: Dragon-AI Agent Date: Fri, 4 Jul 2025 01:35:24 +0000 Subject: [PATCH 2/2] Remove namespace tag from cochlear nerve root term (UBERON:7770009) As pointed out by @gouttegd, namespace tags are not standard practice in this ontology. Removed the namespace tag from the cochlear nerve root term to follow proper UBERON conventions. @dragon-ai-agent --- src/ontology/uberon-edit.obo | 1 - 1 file changed, 1 deletion(-) diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index fda5cbfe1d..c48ab0bc5f 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -221151,7 +221151,6 @@ property_value: dcterms-date "2025-05-27T17:07:22Z" xsd:dateTime [Term] id: UBERON:7770009 name: cochlear nerve root -namespace: uberon def: "Continuation of the cochlear nerve inside the brain. This is located at the dorsolateral junction of the pons and medulla and divides the ventral cochlear nucleus into anteroventral and posteroventral regions." [PMID:27289629] is_a: UBERON:0002211 ! nerve root relationship: part_of UBERON:0000955 ! brain