From 3f0db19e741f77975329fbdeedcaae42ff564c9f Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:14:22 +0900 Subject: [PATCH 01/13] Update RosettaPOSE.md update Grants - the Rosetta POSE grant information --- content/programs/grants/RosettaPOSE.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index 0398d26..e7480a2 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -7,6 +7,8 @@ intro: "More to come!" more: true --- -Check back in a few! +###POSE Phase II: Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem +The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. +Contact: [Julia Koehler-Leman](julia.koehler.leman@omsf.io) From 7cde5a574862ce6f4239aaba2b2069c23b13abff Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:17:36 +0900 Subject: [PATCH 02/13] Update Pose.md update the OMSF POSE grant --- content/programs/grants/Pose.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index db1a314..389b7f0 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -7,9 +7,11 @@ intro: "Aimed at growing and supporting our ecosystem as a distributed network o more: true --- +### NSF POSE Phase II: Building open source ecosystems in molecular sciences through collaboration and technology + The NSF POSE Phase II project, awarded to OMSF in September 2023, focuses on enhancing the open-source ecosystem in molecular sciences through strategic collaboration and technological innovation. It aims to leverage the expertise of OMSF’s in-house software engineers to build a shared infrastructure across OMSF’s hosted projects. These contributions are expected to advance the development of programs and foster a collaborative environment for scientific software development, aligning with the project's goals to bolster molecular modeling and open science practices. -For more details about the goals of this project, visit this [Zenodo page](https://zenodo.org/records/8388247?ref=news.omsf.io). For the latest updates regarding this initiative, visit [https://news.omsf.io](https://news.omsf.io). +For the entire proposal, visit this [Zenodo page](https://zenodo.org/records/8388247?ref=news.omsf.io). For the latest updates regarding this initiative, visit [omsf.substack.com](https://omsf.substack.com). **Github**: [https://github.com/omsf](https://github.com/omsf) **Contact**: Karmen Condic-Jurkic From 4a6769788f78cf48415530eed502e6c2d28ba9ef Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:18:12 +0900 Subject: [PATCH 03/13] Update RosettaPOSE.md fix grammar --- content/programs/grants/RosettaPOSE.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index e7480a2..3ade498 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -7,7 +7,7 @@ intro: "More to come!" more: true --- -###POSE Phase II: Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem +### NSF POSE Phase II: Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. From 95a850bff5bc6dfd09c0c7b74257a402701cdfd9 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:18:37 +0900 Subject: [PATCH 04/13] Update RosettaPOSE.md update again -_- --- content/programs/grants/RosettaPOSE.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index 3ade498..ae67473 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -11,4 +11,4 @@ more: true The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. -Contact: [Julia Koehler-Leman](julia.koehler.leman@omsf.io) +**Contact**: [Julia Koehler-Leman](julia.koehler.leman@omsf.io) From 0466817e98b3d4a4c3bc3115446e7ac8d7944819 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:25:04 +0900 Subject: [PATCH 05/13] Update Pose.md update the information with program outputs --- content/programs/grants/Pose.md | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index 389b7f0..adf9365 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -13,5 +13,8 @@ The NSF POSE Phase II project, awarded to OMSF in September 2023, focuses on enh For the entire proposal, visit this [Zenodo page](https://zenodo.org/records/8388247?ref=news.omsf.io). For the latest updates regarding this initiative, visit [omsf.substack.com](https://omsf.substack.com). -**Github**: [https://github.com/omsf](https://github.com/omsf) +**Program Outputs**: +- [Software Directory](https://github.com/omsf/omsf-directory) +- [Playbooks](https://github.com/omsf/playbooks-website) +- [Actions Runner](https://github.com/omsf/start-aws-gha-runner) **Contact**: Karmen Condic-Jurkic From 7bcc6e4f9ff638822de4d861914c19b498a85a6a Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:25:21 +0900 Subject: [PATCH 06/13] Update Pose.md put a space in --- content/programs/grants/Pose.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index adf9365..b2e9176 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -16,5 +16,5 @@ For the entire proposal, visit this [Zenodo page](https://zenodo.org/records/838 **Program Outputs**: - [Software Directory](https://github.com/omsf/omsf-directory) - [Playbooks](https://github.com/omsf/playbooks-website) -- [Actions Runner](https://github.com/omsf/start-aws-gha-runner) +- [Actions Runner](https://github.com/omsf/start-aws-gha-runner) **Contact**: Karmen Condic-Jurkic From 38bf4ccded17ad55c01501b07ff34d59156455ba Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:25:41 +0900 Subject: [PATCH 07/13] Update Pose.md put the right space in --- content/programs/grants/Pose.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index b2e9176..7aae621 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -16,5 +16,6 @@ For the entire proposal, visit this [Zenodo page](https://zenodo.org/records/838 **Program Outputs**: - [Software Directory](https://github.com/omsf/omsf-directory) - [Playbooks](https://github.com/omsf/playbooks-website) -- [Actions Runner](https://github.com/omsf/start-aws-gha-runner) +- [Actions Runner](https://github.com/omsf/start-aws-gha-runner) + **Contact**: Karmen Condic-Jurkic From 885de4a3db949591d83acab09e16dcc817397ccc Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:31:11 +0900 Subject: [PATCH 08/13] Update Pose.md update description --- content/programs/grants/Pose.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index 7aae621..54e6a99 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -3,7 +3,7 @@ title: "OMSF POSE" image: part: 10 category: "ecosystem" -intro: "Aimed at growing and supporting our ecosystem as a distributed network of autonomous communities connected via shared infrastructure, processes, and values, the Ecosystem Infrastructure team at OMSF is sponsored by the NSF through the POSE grant." +intro: "The NSF supports our Ecosystem Infrastructure team, which develops shared infrastructure for the ecosystem." more: true --- From b813d633bd672939e15afa1a56c549d66400c122 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:32:24 +0900 Subject: [PATCH 09/13] Update RosettaPOSE.md update Rosetta project description --- content/programs/grants/RosettaPOSE.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index ae67473..6d2a98b 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -3,7 +3,7 @@ title: "Rosetta POSE" image: part: 20 category: "ecosystem" -intro: "More to come!" +intro: "Supported by the NSF the Open Rosetta program advances the transition of Rosetta Commons into a sustainable open-source ecosystem." more: true --- From 92071da1264bad4202e33175d5260ef1db4ee4f9 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:33:48 +0900 Subject: [PATCH 10/13] Update RosettaPOSE.md update format --- content/programs/grants/RosettaPOSE.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index 6d2a98b..8cb925f 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -7,7 +7,7 @@ intro: "Supported by the NSF the Open Rosetta program advances the transition of more: true --- -### NSF POSE Phase II: Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem +## Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. From 6599153de6aab0f61ec474c85106c8839df606e2 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:34:19 +0900 Subject: [PATCH 11/13] Update Pose.md update POSE --- content/programs/grants/Pose.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index 54e6a99..773d55b 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -7,7 +7,7 @@ intro: "The NSF supports our Ecosystem Infrastructure team, which develops share more: true --- -### NSF POSE Phase II: Building open source ecosystems in molecular sciences through collaboration and technology +## Building open source ecosystems in molecular sciences through collaboration and technology The NSF POSE Phase II project, awarded to OMSF in September 2023, focuses on enhancing the open-source ecosystem in molecular sciences through strategic collaboration and technological innovation. It aims to leverage the expertise of OMSF’s in-house software engineers to build a shared infrastructure across OMSF’s hosted projects. These contributions are expected to advance the development of programs and foster a collaborative environment for scientific software development, aligning with the project's goals to bolster molecular modeling and open science practices. From b6a97af561e92d1f530055abb886a15658ff3cec Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:38:37 +0900 Subject: [PATCH 12/13] Update RosettaPOSE.md update Rosetta POSE formatting --- content/programs/grants/RosettaPOSE.md | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/content/programs/grants/RosettaPOSE.md b/content/programs/grants/RosettaPOSE.md index 8cb925f..c561249 100644 --- a/content/programs/grants/RosettaPOSE.md +++ b/content/programs/grants/RosettaPOSE.md @@ -3,12 +3,14 @@ title: "Rosetta POSE" image: part: 20 category: "ecosystem" -intro: "Supported by the NSF the Open Rosetta program advances the transition of Rosetta Commons into a sustainable open-source ecosystem." +intro: "Supported by the NSF, the Open Rosetta program advances the transition of Rosetta Commons into a sustainable open-source ecosystem." more: true --- ## Transitioning Rosetta Commons to a self-sustainable Open Source Ecosystem -The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. +The NSF POSE Phase II grant supports the transition of Rosetta Commons toward a fully open-source ecosystem, modernizing governance, licensing, and operational structures to enable broader collaboration across the Rosetta ecosystem. Building on earlier strategic work, the initiative focuses on developing shared standards, improving interoperability with emerging tools, and establishing sustainable infrastructure for community-driven software development. + +The project aims to strengthen long-term sustainability of the Rosetta software suite, expand contributor participation in the developement of Rosetta software, and advance open scientific infrastructure standards. **Contact**: [Julia Koehler-Leman](julia.koehler.leman@omsf.io) From b61894b24e5fe881da7c78cbe11242423ed67db2 Mon Sep 17 00:00:00 2001 From: zacharbake <141340063+zacharbake@users.noreply.github.com> Date: Wed, 11 Feb 2026 19:43:14 +0900 Subject: [PATCH 13/13] Update Pose.md update links --- content/programs/grants/Pose.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/content/programs/grants/Pose.md b/content/programs/grants/Pose.md index 773d55b..2dda0a3 100644 --- a/content/programs/grants/Pose.md +++ b/content/programs/grants/Pose.md @@ -14,8 +14,8 @@ The NSF POSE Phase II project, awarded to OMSF in September 2023, focuses on enh For the entire proposal, visit this [Zenodo page](https://zenodo.org/records/8388247?ref=news.omsf.io). For the latest updates regarding this initiative, visit [omsf.substack.com](https://omsf.substack.com). **Program Outputs**: -- [Software Directory](https://github.com/omsf/omsf-directory) -- [Playbooks](https://github.com/omsf/playbooks-website) +- [Software Directory](https://directory.omsf.io/) +- [Playbooks](https://playbooks.omsf.io/) - [Actions Runner](https://github.com/omsf/start-aws-gha-runner) **Contact**: Karmen Condic-Jurkic