microSLAM/NAMESPACE at main · pollardlab/microSLAM · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(summary,pop.struct.glmm)
export(calculate_grm)
export(fit_beta)
export(fit_tau_test)
export(run_beta_test)
export(run_microslam)
export(run_tau_test)
export(summary)
export(summary.pop.struct.glmm)
export(validate_gene_test_pres_abs)
import(Matrix)
import(ggplot2)
importFrom(Matrix,Matrix)
importFrom(Rfast,spdinv)
importFrom(data.table,fread)
importFrom(data.table,setindexv)
importFrom(dplyr,add_count)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,count)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,reframe)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,select)
importFrom(dplyr,summarize)
importFrom(dplyr,ungroup)
importFrom(ggExtra,ggMarginal)
importFrom(logr,log_close)
importFrom(logr,log_open)
importFrom(logr,log_print)
importFrom(logr,put)
importFrom(magrittr,"%<>%")
importFrom(magrittr,"%>%")
importFrom(pROC,auc)
importFrom(parallelDist,parDist)
importFrom(pheatmap,pheatmap)
importFrom(stats,as.formula)
importFrom(stats,cor)
importFrom(stats,glm)
importFrom(stats,model.matrix)
importFrom(stats,pchisq)
importFrom(stats,pnorm)
importFrom(stats,qnorm)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stringr,str_split)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(utils,file_test)
importFrom(utils,write.table)