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Add ICD-11 diagnosis coding from UMLS cross-references #60

@AlexMikhalev

Description

@AlexMikhalev

Summary

Map extracted disease entities to ICD-11 codes using UMLS CUI cross-references for downstream EHR integration.

Details

  • UMLS provides cross-references between SNOMED CT concepts and ICD-11 codes via CUI mapping
  • Enables billing code support and EHR integration
  • Disease entities extracted by automata get SNOMED CUI -> map to ICD-11 via UMLS MRCONSO
  • Important for product feasibility and real-world deployment

Acceptance Criteria

  • Build CUI-to-ICD-11 mapping from UMLS MRCONSO (SAB=ICD11)
  • Add ICD-11 code to disease entity extraction output
  • Test mapping coverage on diseases in 18 eval cases
  • Document unmapped concepts for future curation

Priority: P3

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