Hi @liqingbioinfo
Thanks for the great tool AT-TWAS!
The WGCNA step, GTEX_WB_Trial3_V1.R ,WGCNA input file is missing in the repo. how to get this file.
femData = fread("Whole-Blood-670-Mean-above1-13k-log2-MinMax_wgcna.csv", header = TRUE, sep = ",");
And I have a question about input file. why not use Whole_blood.v8.normalized_expression.bed.gz,directly downloaded from GTEx portal.
Thanks in advanced!
Hi @liqingbioinfo
Thanks for the great tool AT-TWAS!
The WGCNA step, GTEX_WB_Trial3_V1.R ,WGCNA input file is missing in the repo. how to get this file.
And I have a question about input file. why not use Whole_blood.v8.normalized_expression.bed.gz,directly downloaded from GTEx portal.
Thanks in advanced!