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DiamondLightSource / cryoem-services Public

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Further CLEM bug fixes#252

Merged

tieneupin merged 9 commits intomainDiamondLightSource/cryoem-services:mainfrom

clem-bug-fixesDiamondLightSource/cryoem-services:clem-bug-fixesCopy head branch name to clipboard

Mar 24, 2026

Conversation Commits9 (9)Checks Files changed

Merged

Further CLEM bug fixes#252
tieneupin merged 9 commits intomainfrom
clem-bug-fixes

Commits

Commits on Mar 20, 2026

Load images as 'np.float32' before normalising to 8-bit (np.uin8)
tieneupin
committed
Save LIF master metadata one level further down
tieneupin
committed

Commits on Mar 23, 2026

Run 'process_lif_subimage' in a ProcessPoolExecutor class, and add logic to determine number of workers and threads to use
tieneupin
committed
Use 'tifffile.imread' instead of 'cv2.imread' to open TIFF files
tieneupin
committed
Added 'imagecodecs' as an explicit dependency; needed for opening certain TIFF files
tieneupin
committed
Clip after normalising instead of before
tieneupin
committed
Updated tests
tieneupin
committed
Updated tests
tieneupin
committed
Update CPU resources requested by CLEM LIF service
tieneupin
committed

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