GitHub - GaTechBrownLab/Freq_of_Pa_QS_mutations_2021: Code for O'Connor et al., 2022: https://www.biorxiv.org/content/biorxiv/early/2022/07/27/2021.02.22.432365.full.pdf

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
2022-09-18_add_asterisks_to_proteaseassayanalysis		2022-09-18_add_asterisks_to_proteaseassayanalysis
INPUT		INPUT
OBJECTS		OBJECTS
OUTPUT		OUTPUT
.DS_Store		.DS_Store
.Rhistory		.Rhistory
.gitattributes		.gitattributes
2021_06_03-Truncs.csv		2021_06_03-Truncs.csv
MAIN_IPCD-analysis.R		MAIN_IPCD-analysis.R
analyze_seqs.R		analyze_seqs.R
countmutantsGAMMA.R		countmutantsGAMMA.R
fig1-full.png		fig1-full.png
fig2-full.png		fig2-full.png
gammaalldata.csv		gammaalldata.csv
mutationcleanup.R		mutationcleanup.R
nucleotide.R		nucleotide.R
parse_inputs.R		parse_inputs.R
parse_metadata.R		parse_metadata.R
process_inputs.R		process_inputs.R
proteinvenn-full.png		proteinvenn-full.png
visualize_data_overview.R		visualize_data_overview.R
visualize_distances.R		visualize_distances.R