Refactor/all

.github/workflows/ci.yml

@@ -15,107 +15,45 @@ permissions:
 
 jobs:
   test:
-    name: Test (${{ matrix.os }}, Node ${{ matrix.node }})
-    runs-on: ${{ matrix.os }}
-    timeout-minutes: 15
-
     strategy:
       fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest]
         node: ['20.x', '22.x']
-
-    steps:
-      - name: Checkout
-        uses: actions/checkout@v4
-
-      - name: Setup Node.js ${{ matrix.node }}
-        uses: actions/setup-node@v4
-        with:
-          node-version: ${{ matrix.node }}
-          cache: 'npm'
-
-      - name: Install dependencies
-        run: npm ci
-
-      - name: Run Tests
-        run: npm test
-        env:
-          GEMINI_CODE_PACKAGE_MANAGER: npm
-
-      - name: Debug Info
-        if: failure()
-        run: |
-          echo "Node version: $(node -v)"
-          echo "NPM version: $(npm -v)"
-          ls -R tests
+    uses: ./.github/workflows/reusable-test.yml
+    with:
+      os: ${{ matrix.os }}
+      node-version: ${{ matrix.node }}
+      package-manager: 'npm'
 
   validate:
-    name: Validate Components
-    runs-on: ubuntu-latest
-    timeout-minutes: 5
-
-    steps:
-      - name: Checkout
-        uses: actions/checkout@v4
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: '22.x'
-
-      - name: Debug Working Directory
-        run: |
-          pwd
-          ls -F
-          ls -F scripts/ci/
-
-      - name: Validate agents
-        run: node scripts/ci/validate-agents.js
-
-      - name: Validate hooks
-        run: node scripts/ci/validate-hooks.js
-
-      - name: Validate commands
-        run: node scripts/ci/validate-commands.js
-
-      - name: Validate skills
-        run: node scripts/ci/validate-skills.js
+    uses: ./.github/workflows/reusable-validate.yml
+    with:
+      node-version: '22.x'
 
   security:
     name: Security Scan
     runs-on: ubuntu-latest
     timeout-minutes: 5
-
     steps:
       - name: Checkout
         uses: actions/checkout@v4
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: '22.x'
-
       - name: Run npm audit
         run: npm audit --audit-level=high
 
   lint:
     name: Lint
     runs-on: ubuntu-latest
     timeout-minutes: 5
-
     steps:
       - name: Checkout
         uses: actions/checkout@v4
-
       - name: Setup Node.js
         uses: actions/setup-node@v4
         with:
           node-version: '22.x'
           cache: 'npm'
-
       - name: Install dependencies
         run: npm ci
-
       - name: Run ESLint
         run: npm run lint

.github/workflows/maintenance.yml

@@ -33,7 +33,6 @@ jobs:
       - name: Run security audit
         run: |
           if [ -f package-lock.json ]; then
-            npm ci
             npm audit --audit-level=high
           else
             echo "No package-lock.json found; skipping npm audit"
@@ -43,7 +42,7 @@ jobs:
     name: Stale Issues/PRs
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/stale@v9
+      - uses: actions/stale@5bef64f19d7facfb25b37b414482c7164d639639 # v9
         with:
           stale-issue-message: 'This issue is stale due to inactivity.'
           stale-pr-message: 'This PR is stale due to inactivity.'

.github/workflows/release.yml

@@ -103,10 +103,8 @@ jobs:
             fs.writeFileSync('RELEASE_NOTES.md', changelog);
 
       - name: Create GitHub Release
-        uses: softprops/action-gh-release@v2
+        uses: softprops/action-gh-release@153bb8e04406b158c6c84fc1615b65b24149a1fe # v2
         with:
           tag_name: ${{ github.ref_name }}
           name: ${{ github.ref_name }}
           body_path: RELEASE_NOTES.md
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/reusable-test.yml

@@ -1,5 +1,8 @@
 name: Reusable Test Workflow
 
+permissions:
+  contents: read
+
 on:
   workflow_call:
     inputs:
@@ -36,13 +39,13 @@ jobs:
 
       - name: Setup pnpm
         if: inputs.package-manager == 'pnpm'
-        uses: pnpm/action-setup@v4
+        uses: pnpm/action-setup@b906affcce14559ad1aafd4ab0e942779e9f58b1 # v4
         with:
           version: latest
 
       - name: Setup Bun
         if: inputs.package-manager == 'bun'
-        uses: oven-sh/setup-bun@v2
+        uses: oven-sh/setup-bun@0c5077e51419868618aeaa5fe8019c62421857d6 # v2
 
       - name: Get npm cache directory
         if: inputs.package-manager == 'npm'

.github/workflows/reusable-validate.yml

@@ -35,6 +35,3 @@ jobs:
 
       - name: Validate skills
         run: node scripts/ci/validate-skills.js
-
-      - name: Validate rules
-        run: node scripts/ci/validate-rules.js

commands/checkpoint.toml

@@ -1,4 +1,4 @@
-description = ""
+description = "Create or verify a workflow checkpoint"
 prompt = '''
 # Checkpoint Command
 

commands/claw.toml

@@ -48,7 +48,7 @@ exit                           Quit
 ## Notes
 
 - NanoClaw remains zero-dependency.
-- Sessions are stored at `~/.claude/claw/<session>.md`.
+- Sessions are stored at `~/.gemini/claw/<session>.md`.
 - Compaction keeps the most recent turns and writes a compaction header.
 - Export supports markdown, JSON turns, and plain text.
 

commands/code-review.toml

@@ -1,4 +1,4 @@
-description = ""
+description = "Run security and quality review on uncommitted changes"
 prompt = '''
 # Code Review
 

commands/e2e.toml

@@ -336,7 +336,7 @@ For PMX, prioritize these E2E tests:
 ## Related Agents
 
 This command invokes the `e2e-runner` agent located at:
-`~/.claude/agents/e2e-runner.md`
+`~/.gemini/agents/e2e-runner.md`
 
 ## Quick Commands
 

commands/eval.toml

@@ -1,4 +1,4 @@
-description = ""
+description = "Manage eval-driven development workflow"
 prompt = '''
 # Eval Command
 

commands/evolve.toml

@@ -7,13 +7,13 @@ prompt = '''
 Run the instinct CLI using the plugin root path:
 
 ```bash
-python3 "${CLAUDE_PLUGIN_ROOT}/skills/continuous-learning-v2/scripts/instinct-cli.py" evolve [--generate]
+python3 "${GEMINI_EXTENSION_ROOT}/skills/continuous-learning-v2/scripts/instinct-cli.py" evolve [--generate]
 ```
 
-Or if `CLAUDE_PLUGIN_ROOT` is not set (manual installation):
+Or if `GEMINI_EXTENSION_ROOT` is not set (manual installation):
 
 ```bash
-python3 ~/.claude/skills/continuous-learning-v2/scripts/instinct-cli.py evolve [--generate]
+python3 ~/.gemini/skills/continuous-learning-v2/scripts/instinct-cli.py evolve [--generate]
 ```
 
 Analyzes instincts and clusters related ones into higher-level structures:
@@ -74,15 +74,15 @@ Example:
 
 ## What to Do
 
-1. Read all instincts from `~/.claude/homunculus/instincts/`
+1. Read all instincts from `~/.gemini/homunculus/instincts/`
 2. Group instincts by:
    - Domain similarity
    - Trigger pattern overlap
    - Action sequence relationship
 3. For each cluster of 3+ related instincts:
    - Determine evolution type (command/skill/agent)
    - Generate the appropriate file
-   - Save to `~/.claude/homunculus/evolved/{commands,skills,agents}/`
+   - Save to `~/.gemini/homunculus/evolved/{commands,skills,agents}/`
 4. Link evolved structure back to source instincts
 
 ## Output Format
@@ -100,7 +100,7 @@ Confidence: 85% (based on 12 observations)
 
 Would create: /new-table command
 Files:
-  - ~/.claude/homunculus/evolved/commands/new-table.md
+  - ~/.gemini/homunculus/evolved/commands/new-table.md
 
 ## Cluster 2: Functional Code Style
 Instincts: prefer-functional, use-immutable, avoid-classes, pure-functions
@@ -109,7 +109,7 @@ Confidence: 78% (based on 8 observations)
 
 Would create: functional-patterns skill
 Files:
-  - ~/.claude/homunculus/evolved/skills/functional-patterns.md
+  - ~/.gemini/homunculus/evolved/skills/functional-patterns.md
 
 ## Cluster 3: Debugging Process
 Instincts: debug-check-logs, debug-isolate, debug-reproduce, debug-verify
@@ -118,7 +118,7 @@ Confidence: 72% (based on 6 observations)
 
 Would create: debugger agent
 Files:
-  - ~/.claude/homunculus/evolved/agents/debugger.md
+  - ~/.gemini/homunculus/evolved/agents/debugger.md
 
 ---
 Run `/evolve --execute` to create these files.

commands/instinct-export.toml

@@ -18,7 +18,7 @@ Exports instincts to a shareable format. Perfect for:
 
 ## What to Do
 
-1. Read instincts from `~/.claude/homunculus/instincts/personal/`
+1. Read instincts from `~/.gemini/homunculus/instincts/personal/`
 2. Filter based on flags
 3. Strip sensitive information:
    - Remove session IDs

commands/instinct-import.toml

@@ -7,13 +7,13 @@ prompt = '''
 Run the instinct CLI using the plugin root path:
 
 ```bash
-python3 "${CLAUDE_PLUGIN_ROOT}/skills/continuous-learning-v2/scripts/instinct-cli.py" import <file-or-url> [--dry-run] [--force] [--min-confidence 0.7]
+python3 "${GEMINI_EXTENSION_ROOT}/skills/continuous-learning-v2/scripts/instinct-cli.py" import <file-or-url> [--dry-run] [--force] [--min-confidence 0.7]
 ```
 
-Or if `CLAUDE_PLUGIN_ROOT` is not set (manual installation):
+Or if `GEMINI_EXTENSION_ROOT` is not set (manual installation):
 
 ```bash
-python3 ~/.claude/skills/continuous-learning-v2/scripts/instinct-cli.py import <file-or-url>
+python3 ~/.gemini/skills/continuous-learning-v2/scripts/instinct-cli.py import <file-or-url>
 ```
 
 Import instincts from:
@@ -36,7 +36,7 @@ Import instincts from:
 2. Parse and validate the format
 3. Check for duplicates with existing instincts
 4. Merge or add new instincts
-5. Save to `~/.claude/homunculus/instincts/inherited/`
+5. Save to `~/.gemini/homunculus/instincts/inherited/`
 
 ## Import Process
 
@@ -132,7 +132,7 @@ Added: 8 instincts
 Updated: 1 instinct
 Skipped: 3 instincts (2 duplicates, 1 conflict)
 
-New instincts saved to: ~/.claude/homunculus/instincts/inherited/
+New instincts saved to: ~/.gemini/homunculus/instincts/inherited/
 
 Run /instinct-status to see all instincts.
 ```