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@LennonLab

Lennon Lab

Lennon Lab at Indiana University

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  1. ScalingMicroBiodiversity ScalingMicroBiodiversity Public

    code for the rare biosphere project

    Python 9 4

  2. Emergence Emergence Public

    Individual-based modeling for the simultaneous emergence of ecological relationships.

    Python 7 8

  3. QuantitativeBiodiversity-2015 QuantitativeBiodiversity-2015 Public

    Course materials for Indiana University's first Quantitative Biodiversity course

    R 3 5

  4. MicrobialBiodiversityTheory MicrobialBiodiversityTheory Public

    Repo for code from last spring where the Maximum Entropy Theory of Ecology was applied to abundance data from the Human Microbiome Project

    Python 3 7

  5. Growth_Curves Growth_Curves Public

    Lennon Lab Growth Curve Analysis

    R 2 7

  6. residence-time residence-time Public

    code and figures for a residence time modeling project

    Python 2 4

Repositories

Showing 10 of 148 repositories
  • LennonLab/lennonlab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Apr 8, 2026
  • LennonLab/MetabolicDistribution’s past year of commit activity
    R 0 GPL-3.0 2 0 0 Updated Mar 10, 2026
  • deep.oxygen Public
    LennonLab/deep.oxygen’s past year of commit activity
    0 GPL-3.0 2 0 0 Updated Feb 2, 2026
  • LennonLab/SporeLifestyle’s past year of commit activity
    R 0 CC0-1.0 1 0 0 Updated Jan 30, 2026
  • danger.signal Public
    LennonLab/danger.signal’s past year of commit activity
    HTML 0 GPL-3.0 2 0 0 Updated Jan 26, 2026
  • cost_of_spore Public

    Here we quantified the energetic cost of sporulation in units of ATP by integrating time-resolved genome, transcriptome, and proteome profiles. We incorporated our estimates into mechanistic models to show how metabolic constraints shape sporulation efficiency and selection.

    LennonLab/cost_of_spore’s past year of commit activity
    R 1 MIT 3 0 0 Updated Jan 21, 2026
  • LennonLab/VirosporeQuant’s past year of commit activity
    0 2 0 0 Updated Jan 19, 2026
  • metabolake Public

    metabolic distribtuion of plankton

    LennonLab/metabolake’s past year of commit activity
    R 0 GPL-3.0 3 0 0 Updated Jan 7, 2026
  • lennonlab-original.github.io Public archive

    lennon lab website

    LennonLab/lennonlab-original.github.io’s past year of commit activity
    HTML 0 GPL-3.0 1 0 2 Updated Dec 30, 2025
  • Gut Public
    LennonLab/Gut’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 3 0 0 Updated Dec 5, 2025

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