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fix: resolve evaluation metrics bugs in Classification_Transformers #229

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fix: resolve evaluation metrics bugs in Classification_Transformers #229

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6 changes: 4 additions & 2 deletions DeepLense_Classification_Transformers_Archil_Srivastava/eval.py
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Original file line number Diff line number Diff line change
Expand Up @@ -58,6 +58,7 @@ def evaluate(model, data_loader, loss_fn, device):
loss.append(loss_fn(logits, y))
accuracy.append(accuracy_fn(logits, y, num_classes=NUM_CLASSES))
class_auroc.append(auroc_fn(logits, y, num_classes=NUM_CLASSES, average=None))
micro_auroc.append(auroc_fn(logits, y, num_classes=NUM_CLASSES, average="micro"))
macro_auroc.append(auroc_fn(logits, y, num_classes=NUM_CLASSES, average="macro"))

result = {
Expand All @@ -84,6 +85,7 @@ def evaluate(model, data_loader, loss_fn, device):
# Wandb-specific params
parser.add_argument("--runid", type=str, help="ID of train run")
parser.add_argument("--project", type=str, default="ml4sci_deeplense_final")
parser.add_argument("--entity", type=str, default=os.environ.get("WANDB_ENTITY", None))

# Device to run on
parser.add_argument(
Expand All @@ -93,7 +95,7 @@ def evaluate(model, data_loader, loss_fn, device):

# Start wandb run
with wandb.init(
entity="_archil", project=run_config.project, id=run_config.runid, resume="must"
entity=run_config.entity, project=run_config.project, id=run_config.runid, resume="must"
):
# Get best device on machine
device = get_device(run_config.device)
Expand Down Expand Up @@ -169,7 +171,7 @@ def evaluate(model, data_loader, loss_fn, device):
roc_auc = dict()
for idx, cls in enumerate(LABELS):
class_truth = (metrics["ground_truth"].numpy() == idx).astype(int)
class_pred = torch.nn.functional.softmax(metrics["logits"]).numpy()[
class_pred = torch.nn.functional.softmax(metrics["logits"], dim=-1).numpy()[
..., idx
]
fpr[idx], tpr[idx], _ = roc_curve(class_truth, class_pred)
Expand Down
3 changes: 2 additions & 1 deletion DeepLense_Classification_Transformers_Archil_Srivastava/train.py
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Original file line number Diff line number Diff line change
Expand Up @@ -187,6 +187,7 @@ def train(
)
parser.add_argument("--log_interval", type=int, default=100)
parser.add_argument("--project", type=str, default="ml4sci_deeplense_final")
parser.add_argument("--entity", type=str, default=os.environ.get("WANDB_ENTITY", None))

# Timm-Specific parameters
parser.add_argument("--model_name", type=str, default="vit_base_patch16_224")
Expand Down Expand Up @@ -234,7 +235,7 @@ def train(

# Start wandb run
with wandb.init(
entity="_archil",
entity=run_config.entity,
project=run_config.project,
config=run_config,
group=group,
Expand Down
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