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Handling multiple is_a annotations #107

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Handling multiple is_a annotations #107

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20 changes: 14 additions & 6 deletions src/vfb/curation/curation_writer.py
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Original file line number Diff line number Diff line change
Expand Up @@ -291,13 +291,21 @@ def object_kwarg_proc(rw):
if o_is_ind:
self.warn(context_name="object",
context=o,
message="You can't classify an individual with an individual") # Better make exception ?
self.stat = False # Better try except here?
message="You can't classify an individual with an individual")
self.stat = False
else:
self.ew.add_named_type_ax(s=subject_id,
o=object_id,
edge_annotations=edge_annotations,
match_on='short_form')
# Check if object_id is a pipe-separated string of IDs
if '|' in object_id:
object_ids = object_id.split('|')
else:
object_ids = [object_id]

# Loop over each ID in object_ids and call add_named_type_ax for each one
for oid in object_ids:
self.ew.add_named_type_ax(s=subject_id,
o=oid.strip(),
edge_annotations=edge_annotations,
match_on='short_form')
return True
elif r in self.relation_lookup.keys():
relation_id = self.relation_lookup[r]
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