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The benchmark POM was referencing an outdated parent version, causing build failures. Added benchmark/pom.xml to the version update checklist to prevent future version drift. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Add the select(projection: expression) function to the FHIRPath engine, which evaluates a projection expression for each item in the input collection and flattens the results. This complements the existing where() function by supporting element transformation rather than filtering. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Adds the STU FHIRPath repeatAll() function which recursively evaluates a projection expression on each item in the input collection, collecting all results without deduplication. Uses Spark's Variant type as an intermediate representation to handle schema divergence across nesting levels in self-referential FHIR structures like Questionnaire.item. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Extract magic depth limit to named constant, make variantTransformTree() delegate to variantUnwrap(), expose failOnError parameter in UnresolvedVariantUnwrap, mark repeatAll with EXPERIMENTAL profile, strengthen test assertions, and add clarifying comments. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
ResourceCollection.copyWith() was re-deriving the extension map from the new column representation, which fails for non-resource structs (like Extension) that lack the _extension field. This caused repeatAll(extension) to only return top-level extensions, missing nested sub-extensions. Added a private constructor that accepts an explicit extension map column, and updated copyWith() to use it. Also consolidated RepeatAllFunctionDslTest from 13 methods to 7 by chaining groups that share the same resource setup, and refined the delta spec for same-type recursion depth scenarios. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…or repeatAll() Replace hardcoded same-type recursion depth with configurable maxExtensionDepth via FhirpathConfiguration. Non-Extension same-type depth exhaustion now raises an error instead of silently returning bounded results, catching infinite recursion in expressions like repeatAll($this) or repeatAll(first()). Support EvaluationContext injection in FHIRPath function parameter resolution so that functions can access configuration without changing the public API. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…cally Expressions like gender.repeatAll($this) are genuinely infinite but were silently returning truncated results due to a primitive type shortcut that bypassed recursion detection. Replaced the shortcut with a static type analysis gate that applies the traversal expression twice (level_0 and level_1) to classify behavior before any tree traversal. Non-recursive traversals now return level_0 directly for all types, and self-referential primitives raise an immediate error with a distinct message. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…ication Add repeat() as a wrapper around repeatAll() that deduplicates results using the collection's equality comparator. Only Equatable types with a FHIRPath type (primitives, Coding, Quantity) are deduplicated; complex backbone elements are returned as-is. Add allowPrimitiveSelfRef parameter to repeatAll() so repeat() can handle self-referential primitive traversal where deduplication guarantees termination. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…mprove error messages The try-catch in mapChildren now only wraps the Catalyst resolution call, preventing unrelated errors from being silently swallowed. Error messages are made generic to work with both repeatAll() and repeat() functions. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…repeat Adds an explicit check for indeterminate FHIR types (empty getFhirType()) before the type consistency gate, preventing unresolved choice elements from silently passing. Also treats resource types like primitives in the type analysis gate, since they use boolean existence columns rather than structs. Updates repeat() to suppress depth exhaustion errors via the allowSelfReference flag, relying on deduplication for termination. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
The config parameter controlled depth for all repeat()/repeatAll() traversals, not just Extensions. Renamed to align with the existing QueryConfiguration.maxUnboundTraversalDepth naming. Also simplified redundant instanceof Equatable check in Collection.repeat(). Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
…tion Wire QueryConfiguration.maxUnboundTraversalDepth through to FHIRPath evaluation so repeat()/repeatAll() respect user-configured depth limits. Align @min constraint to 1 on both config classes. Make ViewDefinition repeat clause error on non-Extension depth exhaustion. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Cover unresolved state, withNewChildrenInternal, mapChildren resolution with ArrayType and non-ArrayType schemas, and failOnError propagation. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Cover Variant-based tree traversal with schema divergence, depth limiting, error-on-exhaustion, and direct Variant round-trip unwrapping. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Extract duplicated "unknown" literal into constant, replace lambdas with method references, fix variable naming conventions, and remove unnecessary public modifier on test class. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Add non-empty metadata to column aliases in Projection.renderColumn() to prevent Spark's RemoveRedundantAliases rule from collapsing the Project above Generate, which caused column shifting when collecting rows via toPandas() or collectAsList(). Add integration tests using DatasetAssert.hasRows() in Java and exact row assertions in Python to verify physical row data integrity. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
StructProduct's eval and doGenCode paths passed null as the dataType when copying struct fields via InternalRow.get(), which crashed with NPE for UnsafeRow (Tungsten format from createDataFrame). Fixed by passing the actual field data types. Restructured StructProduct tests to run in both codegen and interpreted modes via an abstract base class, replacing the separate codegen-disabled test method. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
The column transform in repeatAll() was derived from the input collection (e.g. QuestionnaireResponse) instead of the level-0 result (e.g. QuestionnaireResponseItemComponent). This caused union expressions like repeat(item | answer.item) to fail because answer is not a valid path on the resource type. The transform now operates on the recursive element type where all paths in the expression are valid. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Add documentation for the new projection and recursive traversal functions introduced in PR #2566. Update the server configuration reference with the maxUnboundTraversalDepth query parameter.
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