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…ying files in clustering_plots.ipynb THEN hitting play once again. also added some extra comments for clarity on variables, as well as adding more tuning parameters to parameter cell
…nformation, added more parameters for scaling flake size, and fixed functions in analysis notebook to reflect changes as well as adding an assertion for a no flake sim
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Densities correctly calculated, time is logged, start_file contains flake_beads, updated function logic to be truly play and analyze