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1. GAMuT GAMuT Public

   kernel distance-covariance method for gene-based association testing of rare variants with multiple phenotypes in a sample of unrelated subjects

   R 5 1

2. robust-joint-interaction robust-joint-interaction Public

   We developed an R function to allow users to perform robust joint testing of SNP and SNP-environment interaction within the PLINK software toolset for whole genome association analysis. The softwar…

   HTML 3 1

3. stratscore stratscore Public

   software that controls for population stratification in case-control association studies

   R 1

4. BiasedUrn BiasedUrn Public

   This R package is a modified version of the 'BiasedUrn' package developed by Agner Fog; the original package can be found on the CRAN site. We created this modified package to facilitate permutatio…

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5. LSKM LSKM Public

   A powerful and flexible multilocus association test for quantitative traits.

   R

6. Chaplin Chaplin Public

   Chaplin is software for identifying specific haplotypes or haplotype features that are associated with disease using genotype data from a case-control study. The program utilizes statistical method…