The code which I used in this Bachelor thesis is spread over several file. I will go through them hierarchical.
\testing
In this folder is the python file which I used to create the Figure 1. In the subfolder \\testing\\plots you can find the plot I used in my thesis.
\pipeline_for_sampling
The 4 Jupiter-Notebook files pipeline_example_COnversion-Reaction_likelihood_and_prior, pipeline_example-Conversion-Reaction_marginal_likelihood,
pipeline_example-mRNA-transfection_likelihood_and_prior and pipeline_example-mRNA-transfection_marginal_likelihood were uses to generate the sampling for the two models
in section 3.1.4 and 3.1.5.
All sample results were saved in the corresponding folders \\Results_CR_FP, \\Results_CR_MP, \\Results_mRNA_FP and \\Results_mRNA_MP. Because we
\pipeline_for_sampling\data_convert_plot
In this python file all plots and changes for the samplings were executed. The only exceptions are the files \\pipeline_for_sampling\\CR_offset_and_precision and
\\pipeline_for_sampling\\mRNA_offset_and_precision where I created the offset and precision data out of the sampled parameters for the Marginal approach.
\pipeline_for_sampling\plots
Here are all plots which I created for the Gaussian noise case. They are ordered by the model and the approach for which they were created.
\pipeline_for_sampling\conversion_reaction
In this folder all data which we used for the Conversion Reaction model is saved
\pipeline_for_sampling\mRNA-transfection
In this folder all data which we used for the mRNA model is saved