Skip to content

build, run: Always run Snakemake with --benchmark-extended#513

Draft
victorlin wants to merge 4 commits intomasterfrom
victorlin/snakemake-benchmark-extended
Draft

build, run: Always run Snakemake with --benchmark-extended#513
victorlin wants to merge 4 commits intomasterfrom
victorlin/snakemake-benchmark-extended

Conversation

@victorlin
Copy link
Member

@victorlin victorlin commented Mar 18, 2026

Two prep commits and one main commit that closes #467.

Checklist

  • Checks pass
  • Locally tested both build and run with measles
  • Update changelog

This only applies to --cores and --resources, not
--local-storage-prefix.
This is more consistent with the run and view commands.
@victorlin victorlin force-pushed the victorlin/snakemake-benchmark-extended branch from 63b0216 to 928646e Compare March 18, 2026 23:59
@victorlin victorlin marked this pull request as draft March 18, 2026 23:59
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

build/run: Add Snakemake's --benchmark-extended as a default flag

1 participant