Draft
Conversation
Adds a copy of the original Snakemake-based Zika tutorial from the Augur repository. This is part of an effort to refine the content of the Zika and TB tutorials to better introduce the concept of bioinformatics workflows with Snakemake and justify their use. This content provides a bridge from the first Zika tutorial that focuses on Augur commands on the shell and the SARS-CoV-2 tutorial that focuses on configuring a sophisticated Snakemake workflow through YAML files.
huddlej
force-pushed
the
refine-workflow-tutorials
branch
from
5513735 to
12a819e
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Adds a copy of the original Snakemake-based Zika tutorial from the Augur repository. This is part of an effort to refine the content of the Zika and TB tutorials to better introduce the concept of bioinformatics workflows with Snakemake and justify their use. This content provides a bridge from the first Zika tutorial that focuses on Augur commands on the shell and the SARS-CoV-2 tutorial that focuses on configuring a sophisticated Snakemake workflow through YAML files.