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fixing up channel logic, doing more tests nf-core CI #48: Commit 0dd79b6 pushed by number-25
3m 4s dev
dev
3m 4s
workflow tweaks nf-core CI #47: Commit 4a1a1cd pushed by number-25
3m 8s dev
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appears that sylph-tax is functional, isoquant taking far too long on… nf-core CI #46: Commit 76779cc pushed by number-25
2m 58s dev
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2m 58s
toying more with sylph-tax, rejigging main workflow.nf nf-core CI #45: Commit 22c587b pushed by number-25
2m 21s dev
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2m 21s
testing bam input and mapping to transcriptome nf-core CI #44: Commit 7881bd6 pushed by number-25
3m 2s dev
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getting closer to testing sylph out, need to index unmapped bam and c… nf-core CI #43: Commit f9c5123 pushed by number-25
2m 51s dev
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2m 51s
adding in sylph profiling of unmapped reads, still much to do nf-core CI #42: Commit 92f5838 pushed by number-25
3m 23s dev
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3m 23s
fixing bam inputs nf-core CI #41: Commit 2006a41 pushed by number-25
3m 23s dev
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3m 23s
mapping to transcriptome tested on full size dataset, bam_input on fu… nf-core CI #40: Commit 83ecfc0 pushed by number-25
4m 13s dev
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successfully tested mapping to transcriptome on minmimal test dataset… nf-core CI #39: Commit 992461c pushed by number-25
2m 58s dev
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included code to allow for the mapping to the transcriptome, as well … nf-core CI #38: Commit 3bbe235 pushed by number-25
3m 30s dev
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Update usage.md nf-core CI #37: Commit f3d0390 pushed by number-25
3m 47s dev
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3m 47s
Update README.md nf-core CI #36: Commit 07af139 pushed by number-25
41s dev
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validateParams is working, nf-schema plugins are working nf-core CI #35: Commit 951dacc pushed by number-25
2m 38s dev
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first push of the year, testing out a full dataset using gzipped inpu… nf-core CI #34: Commit 1677f70 pushed by number-25
3m 24s dev
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3m 24s
new version of bambu added into module, not tested yet within worklfo… nf-core CI #33: Commit 549d3b3 pushed by number-25
3m 22s dev
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updating config nf-core CI #32: Commit 2b88ddb pushed by number-25
2m 46s dev
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2m 46s
some more schema tweaking, help etc - still not functioning as expected nf-core CI #31: Commit 4980e4a pushed by number-25
4m 6s dev
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toying with some nf-schema functionality, making small additions, rem… nf-core CI #30: Commit b0aa23a pushed by number-25
2m 59s dev
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2m 59s
attempting to implement the nf-schema plugins, still need to do help … nf-core CI #29: Commit 9e2a589 pushed by number-25
3m 16s dev
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added software citations to CITATIONS.md nf-core CI #28: Commit ed1df3c pushed by number-25
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removing all references to sequencing summary (samplesheet input) nf-core CI #27: Commit e87659a pushed by number-25
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adding cover image nf-core CI #26: Commit 7289a08 pushed by number-25
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mmmmm nf-core CI #25: Commit 86b45c0 pushed by number-25
3m 22s dev
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adding final additions to docs/outputs nf-core CI #24: Commit a4cfb2c pushed by number-25
4m 27s dev
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4m 27s