Add 25 epithelium terms for mucosal structures #3622
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Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
Added epithelium terms with proper part_of relationships for: - cecum mucosa - tracheal mucosa - bronchial mucosa - olfactory segment of nasal mucosa - cervical mucosa - gland of nasal mucosa - colorectal mucosa - respiratory segment of nasal mucosa - reproductive system mucosa - viscerocranial mucosa - lower esophagus mucosa - esophagogastric junction mucosa - alveolar mucosa These terms follow the pattern: epithelium AND (part_of some [specific mucosa]) All terms are subclasses of UBERON:0003350 (epithelium of mucosa) @dragon-ai-agent Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
Added epithelium terms with proper part_of relationships for: - mucosa of stomach - mucosa of small intestine - mucosa of urinary bladder - mucosa of larynx - mucosa of anal canal - mucosa of rectum - mucosa of ureter - mucosa of vagina - mucosa of ascending colon - mucosa of transverse colon - mucosa of descending colon - mucosa of sigmoid colon Total: 25 new epithelium terms created (UBERON:9900000-9900024) All terms follow the pattern: epithelium AND (part_of some [specific mucosa]) @dragon-ai-agent Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
Added CHANGES_SUMMARY.md documenting all 25 new epithelium terms, the problem being addressed, and validation results. @dragon-ai-agent Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
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[WIP] Add mucosal epithelium terms for improved querying
Add 25 epithelium terms for mucosal structures
Nov 3, 2025
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UBERON had ~120 mucosa terms but only ~60 corresponding epithelium terms with proper
part_ofrelationships, breaking the navigation path: mucosa → epithelium → cell types.Changes
Added 25 new epithelium terms (UBERON:9900000-9900024) following the standard pattern:
Coverage Added
GI tract (16 terms): cecum, colorectum, ascending/transverse/descending/sigmoid colon, stomach, small intestine, anal canal, rectum, esophagogastric junction, lower esophagus, alveolar
Respiratory (5 terms): trachea, bronchi, olfactory/respiratory segments of nasal mucosa, larynx
Urogenital (4 terms): urinary bladder, ureter, cervix, vagina, reproductive system
Terms Already Covered
All terms validated with
robot convert.Original prompt
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