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6 repositories

simd-minimizers
Public
A SIMD-accelerated library to compute random minimizers
rust bioinformatics neon
rust bioinformatics neon simd avx2 k-mers minimizers
Rust
•8•42•8•0•Updated Apr 6, 2026Apr 6, 2026
packed-seq
Public
Bitpacked sequence trait and implementation
rust bioinformatics neon
rust bioinformatics neon simd avx2 dna-sequences k-mers
Rust
•
MIT License
•3•18•2•0•Updated Feb 27, 2026Feb 27, 2026
seq-hash
Public
Rolling k-mer hashes of bitpacked (DNA) sequences
Rust
•1•11•0•0•Updated Jan 20, 2026Jan 20, 2026
rust-seq.github.io
Public
The `rust-seq` website.
0•0•0•1•Updated Oct 13, 2024Oct 13, 2024
minimizer-iter
Public
Iterate over minimizers of a DNA sequence
Rust
•
MIT License
•3•32•1•0•Updated Jul 12, 2024Jul 12, 2024
minimizer-queue
Public
Fast computation of minimizers using a monotone queue
rust queue hash
rust queue hash monotone minimizer
Rust
•
MIT License
•2•1•1•0•Updated Jul 12, 2024Jul 12, 2024

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