MAINT Remove statsmodels#236

Merged

BorisMuzellec merged 15 commits intomainfrom

remove_statsmodels

Feb 19, 2024

Commits on Feb 13, 2024

refactor: remove statsmodels with custom gamma GLM implementation for parametric trend curve in default inference model
Boris MUZELLEC
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fix: use consistent ordering for trend curve coefficients
Boris MUZELLEC
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feat: catch gamma GLM failure and switch to mean fit
Boris MUZELLEC
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build: remove statsmodels dependency
Boris MUZELLEC
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CI: ignore deprecation warning raised by pandas regarding Pyarrow.
Boris MUZELLEC
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CI: ignore deprecation warning raised by pandas regarding Pyarrow.
Boris MUZELLEC
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Commits on Feb 14, 2024

fix: switch to mean fit if all coeffs are 0
Boris MUZELLEC
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test: catch both warnings in test_zero_inflated
Boris MUZELLEC
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build: bump scipy version requirement to get access to false_discovery_control
Boris MUZELLEC
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build: BREAKING CHANGE deprecate python 3.8
Boris MUZELLEC
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refactor: switch from RuntimeWarning to UserWarning
Boris MUZELLEC
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docs: remove statsmodels dependency
Boris MUZELLEC
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fix: stop size factor iterations if no eligible genes are left for the fit
Boris MUZELLEC
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Commits on Feb 15, 2024

docs: improve lowess parameter description
Boris MUZELLEC
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Commits on Feb 19, 2024

refactor: return convergence status from gamma glm fit instead of raising error
Boris MUZELLEC
committed