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feat: add layer argument to 10x read functions#4072

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feat: add layer argument to 10x read functions#4072
flying-sheep wants to merge 1 commit intomainfrom
pa/layer-arg

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waits for design decision in #4071

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codecov Bot commented Apr 17, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 77.96%. Comparing base (2fa6ac0) to head (3678191).
✅ All tests successful. No failed tests found.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #4072      +/-   ##
==========================================
- Coverage   78.60%   77.96%   -0.64%     
==========================================
  Files         118      118              
  Lines       12756    12767      +11     
==========================================
- Hits        10027     9954      -73     
- Misses       2729     2813      +84     
Flag Coverage Δ
hatch-test.low-vers 77.92% <100.00%> (+0.01%) ⬆️
hatch-test.pre 20.75% <40.00%> (-57.74%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines Coverage Δ
src/scanpy/_settings/presets.py 87.02% <100.00%> (+0.51%) ⬆️
src/scanpy/readwrite.py 81.08% <100.00%> (-0.21%) ⬇️

... and 8 files with indirect coverage changes

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Add layer parameter to read_10x_* functions

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