fix: fix modulatity inconsistency by using Weighted_Adjacency directly #4113
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May 8, 2026 in 1s
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Codecov Report
❌ Patch coverage is 56.25000% with 7 lines in your changes missing coverage. Please review.
main@6af627e). Learn more about missing BASE report.
✅ All tests successful. No failed tests found.
| Files with missing lines | Patch % | Lines |
|---|---|---|
| src/scanpy/tools/_paga.py | 20.00% | 4 Missing |
| src/scanpy/neighbors/__init__.py | 0.00% | 2 Missing |
| src/scanpy/plotting/_tools/paga.py | 66.66% | 1 Missing |
Additional details and impacted files
@@ Coverage Diff @@
## main #4113 +/- ##
=======================================
Coverage ? 79.44%
=======================================
Files ? 119
Lines ? 12760
Branches ? 0
=======================================
Hits ? 10137
Misses ? 2623
Partials ? 0 | Files with missing lines | Coverage Δ | |
|---|---|---|
| src/scanpy/_utils/__init__.py | 73.68% <ø> (ø) |
|
| src/scanpy/tools/_draw_graph.py | 69.01% <100.00%> (ø) |
|
| src/scanpy/tools/_leiden.py | 92.04% <100.00%> (ø) |
|
| src/scanpy/tools/_louvain.py | 100.00% <ø> (ø) |
|
| src/scanpy/plotting/_tools/paga.py | 64.32% <66.66%> (ø) |
|
| src/scanpy/neighbors/__init__.py | 81.79% <0.00%> (ø) |
|
| src/scanpy/tools/_paga.py | 32.05% <20.00%> (ø) |
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