Release 0.3.4 [2018/09/04]

New Features

• SLIMM now can output raw coverage profile -co option
• SLIMM supports windows from v0.3.4

Release 0.3.3 [2018/08/02]

New Features

• small bug fix for crashes related to accessions without taxonomic id

Release 0.3.2 [2018/06/15]

New Features

• A single rank profile is reported to avoid confusion
• Metaphlan like lineage in reports
• Unclassified clades
• Removed name and children_count columns
• Handle the case of missing accessions

Release 0.3.1 [2018/03/13]

New Features

• added abundance cutoff parameter
• added strain level identification
• added python script to merge multiple SLIMM profiles by taxaid

Release 0.3.0 [2018/02/25]

New Features

• New binary for preparing SLIMM's database

  • directly from reference fasta files
  • uses the standard accession2taxaid mapping to resolve organism names and taxonomy

• Building custom databases is easier and is not limited to Bacteria, Archaea and Virus groups

• Output format changed

  • taxonomic lineage of the detected organism is part of the report
  • unified taxonomic profile for all ranks

Release 0.2.2 [2017/04/20]

New Features

• Notification for new releases added.
  SLIMM will be able to notify its users if newer versions have been released

Release 0.2.1 [2017/02/22]

New Features

• Upgraded to SeqAn 2.3.2

Release 0.2 [2017/01/12]

New Features

• raw output table is not produced by default
• profiles for all taxonomic ranks are produced by default

Release 0.1 [2016/09/23]

First release of SLIMM

Seqan Version

2.2.0