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Add complete runnable BulkRNA-BERT TCGA survival example with all data #711

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Add complete runnable BulkRNA-BERT TCGA survival example with all data #711

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cc20e1c
Create bulk_rna_bert_tcga_survival.ipynb
jlinecodes Dec 8, 2025
3879eac
Delete examples/bulk_rna_bert_tcga_survival.ipynb
jlinecodes Dec 8, 2025
28d196e
Create bulk_rna_bert_tcga_survival.py
jlinecodes Dec 8, 2025
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jlinecodes Dec 8, 2025
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60,666 changes: 60,666 additions & 0 deletions examples/TCGA-06-0187-01A.tsv
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60,666 changes: 60,666 additions & 0 deletions examples/TCGA-06-0744-01A.tsv
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60,666 changes: 60,666 additions & 0 deletions examples/TCGA-06-2559-01A.tsv
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60,666 changes: 60,666 additions & 0 deletions examples/TCGA-27-2521-01A.tsv
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422 changes: 422 additions & 0 deletions examples/bulk_rna_bert_tcga_survival.py
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99 changes: 99 additions & 0 deletions examples/nationwidechildrens.org_clinical.TCGA-06-0187.xml
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202 changes: 202 additions & 0 deletions examples/nationwidechildrens.org_clinical.TCGA-06-0744.xml
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142 changes: 142 additions & 0 deletions examples/nationwidechildrens.org_clinical.TCGA-06-2559.xml
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223 changes: 223 additions & 0 deletions examples/nationwidechildrens.org_clinical.TCGA-27-2521.xml
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