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transcript-discovery

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GoekeLab / bambu-pipe

Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu

rna-seq nanopore pipeline genomics nextflow pacbio transcriptomics single-cell transcript-quantification bambu isoform-quantification spatial-transcriptomics long-read-sequencing long-read-rna-seq transcript-discovery

Updated May 20, 2026
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