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We can't currently sort and index GAF files on upload (until vg fixes vgteam/vg#4521).

This locks them out of the file upload picker, makes an unimplemented error in the upload handler to catch them, and adds some not-very-pretty but functional support for showing an error when an upload fails or is rejected.

We should fix vg to support writing GAF indexes (or ship tabix and bgzip as tube map dependencies?) and turn the uploads on again.

We need to use .gaf and .gz as the upload filters when we do; .gaf.gz doesn't actually work since you can only match the last extension in the file picker.

@adamnovak adamnovak merged commit f5f51d6 into master Feb 10, 2025
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Allow compressing and indexing sorted GAF output

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