Skip to content

@GaTechBrownLab The Brown Lab @ Georgia Tech

Change the repository type filter

All

    Repositories list

    16 repositories

    • microdilutionMIC

      Public
      Calculates minimum inhibitory concentrations from microdilution data.
      R
      •
      MIT License
      •1•0•0•0•Updated Apr 5, 2026Apr 5, 2026

    • abx-inoculum-effects

      Public
      Code for "Quantifying antibiotic susceptibility and inoculum effects using transient dynamics of Pseudomonas aeruginosa"
      MATLAB
      •0•0•0•0•Updated Mar 5, 2026Mar 5, 2026

    • hierarchy

      Public
      Quantitative modeling of multi-signal quorum sensing maps environment to bacterial regulatory responses
      MATLAB
      •0•2•0•0•Updated Sep 7, 2025Sep 7, 2025

    • PyocinTyper

      Public
      Type pyocins of Pseudomonas aeruginosa.
      Nextflow
      •1•0•0•0•Updated Aug 12, 2025Aug 12, 2025

    • Galleria_Survival

      Public
      Analysis for the experiments with Galleria-Pseudomonas model system.
      R
      •
      MIT License
      •1•0•0•0•Updated May 31, 2025May 31, 2025

    • metaAnalysis

      Public
      R
      •
      MIT License
      •1•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • phage-community-dynamics

      Public
      MATLAB
      •0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

    • Rattray-2023-PLOSCompBio

      Public
      Downsampled raw colony images
      Jupyter Notebook
      •1•2•0•0•Updated Oct 17, 2023Oct 17, 2023

    • Freq_of_Pa_QS_mutations_2021

      Public
      Code for O'Connor et al., 2022: https://www.biorxiv.org/content/biorxiv/early/2022/07/27/2021.02.22.432365.full.pdf
      R
      •0•0•0•0•Updated Dec 13, 2022Dec 13, 2022

    • commensal_resistance

      Public
      MATLAB
      •0•0•0•0•Updated Sep 30, 2022Sep 30, 2022

    • Rattray-2022

      Public
      Analysis supplement for Rattray et al., 2022
      0•0•0•0•Updated Apr 26, 2022Apr 26, 2022

    • Varga-et-al_CompetitiveAbxRelease_SRA-upload

      Public
      Processing pipeline for SRA upload from raw data
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 4, 2021Aug 4, 2021

    • qsmodels

      Public archive
      Mathematical Models of Quorum Sensing
      matlabmathematicadifferential-equations
      matlabmathematicadifferential-equationsmathematical-modellingmathematical-biology
      Mathematica
      •0•1•0•0•Updated Feb 10, 2020Feb 10, 2020

    • pa_genomics

      Public
      R
      •1•1•0•0•Updated Dec 18, 2019Dec 18, 2019

    • sbalance

      Public
      Structural Balance in Polymicrobial Networks
      MIT License
      •0•1•0•0•Updated Apr 9, 2018Apr 9, 2018

    • Worm_Tracking

      Public
      A pipeline to analyze microscope images of C. elegans
      0•1•0•0•Updated Mar 7, 2018Mar 7, 2018
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.