🧬 gget enables efficient querying of genomic reference databases

OpenAlpha_Evolve is an open-source Python framework inspired by the groundbreaking research on autonomous coding agents like DeepMind's AlphaEvolve.

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

An open-source platform for developing protein models beyond AlphaFold.

An implementation of the DeepMind's AlphaFold based on PyTorch for research

Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures

PyMOL extension to color AlphaFold structures by confidence (pLDDT).

Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval

Install alphafold on the local machine, get out of docker.

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.

Exploring Evolution-aware & free protein language models as protein function predictors

[𝗡𝗮𝘁𝘂𝗿𝗲 𝗠𝗮𝗰𝗵𝗶𝗻𝗲 𝗜𝗻𝘁𝗲𝗹𝗹𝗶𝗴𝗲𝗻𝗰𝗲] ImmunoStruct enables multimodal deep learning for immunogenicity prediction

RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding

A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.

Singularity recipe for AlphaFold

A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structure prediction analysis.

AlphaFind: Discover structure similarity across the entire known proteome

Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing

A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and checking the druggability with fpocket/Amber.