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zero-shot-prediction

Here are 3 public repositories matching this topic...

elttaes / Revisiting-PLMs

Exploring Evolution-aware & free protein language models as protein function predictors

benchmark pytorch contact-prediction stability multiple-sequence-alignment protein-annotation function-prediction protein-classification alphafold protein-language-model alphafold2 fitness-prediction zero-shot-prediction msa-construction msa-transformer esm1b remote-homology-detection metal-ion-binding

Updated Sep 28, 2024
Python

huldachen / antibody-plm-benchmark

Benchmarking antibody-specific PLMs vs. BLOSUM62 for variant fitness prediction on combinatorial CDR-H3 libraries

benchmark machine-learning deep-learning esm zero-shot-prediction protein-language-models antibody-engineering ablang

Updated Apr 23, 2026
Python

pranavathiyani / ARGEvoFlow

Zero-shot protein language model pipeline for mutational tolerance scoring of antibiotic resistance genes in ESKAPE pathogens

deep-mutational-scanning resistome antimicrobial-resistance antibiotic-resistance-genes zero-shot-prediction protein-language-models esm2 eskape-pathogens mutational-tolerance bacterial-evolution

Updated Apr 24, 2026

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