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Pull requests: loculus-project/loculus

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Pull requests list

feat(prepro): also parse cladeNodeAttrFounderInfo.outbreak.aaMutations.*.privateSubstitutions correctly preprocessing Issues related to the preprocessing component
#6538 opened May 29, 2026 by anna-parker Contributor Loading…
Refactor processing functions to use RawProcessingResult for less verbose error/warning handling
#6537 opened May 29, 2026 by Copilot AI • Draft
3 tasks done
2
@corneliusroemer
feat(ingest): Add host field for INSDC sequences during ingest ingest Ingest pipeline
#6534 opened May 29, 2026 by maverbiest Contributor • Draft
3 tasks
1
3
feat(ingest): do not use ncbi release data for assigning segment groups ingest Ingest pipeline preview Triggers a deployment to argocd
#6527 opened May 28, 2026 by anna-parker Contributor Loading…
1 of 2 tasks
8
chore(dependabot): ignore dtolnay/rust-toolchain updates as we want to stick to v1.92
#6516 opened May 27, 2026 by corneliusroemer Contributor Loading…
8
chore(website): migrate tailwind to v4, daisyui to v5 and flowbite-react to v0.12 preview Triggers a deployment to argocd website Tasks related to the web application
#6510 opened May 27, 2026 by corneliusroemer Contributor Loading…
3
28
feat(website): Add tab on revise page pointing to per-sequence revise button preview Triggers a deployment to argocd website Tasks related to the web application
#6504 opened May 27, 2026 by theosanderson-agent Collaborator Loading…
11
feat(website): Edit individual accession on revise page using form website Tasks related to the web application
#6503 opened May 27, 2026 by tombch Collaborator • Draft
3 tasks
2
POC WIP preview Triggers a deployment to argocd
#6498 opened May 26, 2026 by fhennig Contributor Loading…
@fhennig
3
fix(website): use consistent checkbox css in search filters preview Triggers a deployment to argocd website Tasks related to the web application
#6495 opened May 22, 2026 by corneliusroemer Contributor Loading…
1
7
Add Open Graph and social card metadata configuration deployment Code changes targetting the deployment infrastructure preview Triggers a deployment to argocd website Tasks related to the web application
#6494 opened May 21, 2026 by theosanderson Member • Draft
3 tasks done
feat(website, backend): Sequence citations backend related to the loculus backend component website Tasks related to the web application
#6491 opened May 21, 2026 by tombch Collaborator • Draft
3 tasks
2
Address original data download review comments backend related to the loculus backend component website Tasks related to the web application
#6448 opened May 16, 2026 by theosanderson-agent Collaborator Loading…
feat(deployment,website): Split website organism configs into separate ConfigMaps deployment Code changes targetting the deployment infrastructure website Tasks related to the web application
#6447 opened May 15, 2026 by theosanderson-agent Collaborator Loading…
5
fix(website): Make custom tooltips clickable on mobile preview Triggers a deployment to argocd website Tasks related to the web application
#6427 opened May 13, 2026 by tombch Collaborator Loading…
3 tasks
5
fix(website): improve revocation banner placement and wording website Tasks related to the web application
#6426 opened May 13, 2026 by theosanderson-agent Collaborator • Draft
3 of 5 tasks
feat(deployment): swap Keycloak for Authelia + lldap + registration-service backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure website Tasks related to the web application
#6419 opened May 13, 2026 by theosanderson-agent Collaborator • Draft
4
feat(backend, website): rename get-data-to-edit endpoint and surface version comment via it backend related to the loculus backend component website Tasks related to the web application
#6412 opened May 12, 2026 by theosanderson-agent Collaborator • Draft
3 of 5 tasks
1
[codex] Show restricted download exclusion count website Tasks related to the web application
#6400 opened May 11, 2026 by theosanderson Member • Draft
feat(website): display version comment on review cards for revocations backend related to the loculus backend component website Tasks related to the web application
#6395 opened May 11, 2026 by theosanderson-agent Collaborator • Draft
4 of 8 tasks
1
2
feat!(backend): file sharing - prevent overwrites of uploaded file backend related to the loculus backend component preprocessing Issues related to the preprocessing component
#6381 opened May 8, 2026 by anna-parker Contributor Loading…
3 tasks
1
6
theo explorations deployment Code changes targetting the deployment infrastructure
#6366 opened May 7, 2026 by theosanderson-agent Collaborator • Draft
1
feat(deposition): delete sequence metadata from submission table afte… deposition related to ENA/INSDC deposition
#6335 opened May 2, 2026 by anna-parker Contributor • Draft
3 tasks
File sharing session backend related to the loculus backend component preprocessing Issues related to the preprocessing component update_db_schema
#6323 opened Apr 30, 2026 by anna-parker Contributor • Draft
3 tasks
2
1
feat(website): decrease white space on details page website Tasks related to the web application
#6322 opened Apr 29, 2026 by anna-parker Contributor Loading…
14
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